Sequence 1: | NP_477044.1 | Gene: | Ret / 43875 | FlyBaseID: | FBgn0011829 | Length: | 1235 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006251452.1 | Gene: | Fgfr3 / 84489 | RGDID: | 620714 | Length: | 804 | Species: | Rattus norvegicus |
Alignment Length: | 436 | Identity: | 168/436 - (38%) |
---|---|---|---|
Similarity: | 237/436 - (54%) | Gaps: | 69/436 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 705 LFVLLL----LCLLIAQRKMLQRRLGKQSMTTSSKQALP-------ESGGGDFALMPLQSGFRFE 758
Fly 759 SG---------------DAKWEFPREKLQLDTVLGEGEFGQVLK----GFATEIAGLPGITTVAV 804
Fly 805 KMLKKGSNSVEYMALLSEFQLLQEV-SHPNVIKLLGACTSSEAPLLIIEYARYGSLRSYLRLSRK 868
Fly 869 IECAGVDFADGV-----EPVNVKMVLTFAWQICKGMAYLSELKLVHRDLAARNVLLADGKICKIS 928
Fly 929 DFGLTRDVYEDDAYLKRSRDRVPVKWMAPESLADHVYTSKSDVWSFGVLCWELITLGASPYPGIA 993
Fly 994 PQNLWSLLKTGYRMDRPENCSEAVYSIVRTCWADEPNGRPSFKFLASEFEKLL--GNNAKYIDL- 1055
Fly 1056 -----------ETNAVSNPLYCGDDSALITTELGEPESLQHLWSPP 1090 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ret | NP_477044.1 | PKc_like | 770..1049 | CDD:304357 | 131/290 (45%) |
TyrKc | 771..1042 | CDD:197581 | 130/280 (46%) | ||
Fgfr3 | XP_006251452.1 | IGc2 | 51..108 | CDD:197706 | |
IG | 52..123 | CDD:214652 | |||
Ig2_FGFR | 155..239 | CDD:143265 | |||
IG_like | 254..349 | CDD:214653 | |||
Ig3_FGFR | 262..350 | CDD:143175 | |||
PTKc_FGFR3 | 457..790 | CDD:173652 | 146/341 (43%) | ||
Pkinase_Tyr | 470..746 | CDD:285015 | 130/280 (46%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |