DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ret and Fgfr1

DIOPT Version :9

Sequence 1:NP_477044.1 Gene:Ret / 43875 FlyBaseID:FBgn0011829 Length:1235 Species:Drosophila melanogaster
Sequence 2:NP_077060.1 Gene:Fgfr1 / 79114 RGDID:620713 Length:822 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RetNP_477044.1 PKc_like 770..1049 CDD:304357
TyrKc 771..1042 CDD:197581
Fgfr1NP_077060.1 Ig1_FGFR 40..118 CDD:143174
IG_like 41..118 CDD:214653
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 120..162
I-set 160..247 CDD:254352
Heparin-binding 160..177
Ig2_FGFR 163..247 CDD:143265
IG_like 262..358 CDD:214653
Ig3_FGFR 270..359 CDD:143175
PTKc_FGFR1 464..765 CDD:270678
Pkinase_Tyr 478..754 CDD:285015
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 770..822
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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