DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ret and Pdgfrl

DIOPT Version :10

Sequence 1:NP_477044.1 Gene:Ret / 43875 FlyBaseID:FBgn0011829 Length:1235 Species:Drosophila melanogaster
Sequence 2:NP_081116.3 Gene:Pdgfrl / 68797 MGIID:1916047 Length:375 Species:Mus musculus


Alignment Length:17 Identity:7/17 - (41%)
Similarity:9/17 - (52%) Gaps:0/17 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 QKSKKKGLPGCDTVCVN 64
            |..|:.|....||||.:
Mouse   175 QYIKQAGTSSTDTVCAD 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RetNP_477044.1 Protein Kinases, catalytic domain 770..1049 CDD:473864
PdgfrlNP_081116.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 20..63
IG_like 83..>143 CDD:214653
Ig strand B 92..96 CDD:409448
Ig strand C 100..104 CDD:409448
Ig strand F 140..144 CDD:409448
Ig 278..372 CDD:472250
Ig strand B 289..293 CDD:409353
Ig strand C 304..308 CDD:409353
Ig strand E 340..344 CDD:409353
Ig strand F 354..359 CDD:409353
Ig strand G 367..370 CDD:409353
Blue background indicates that the domain is not in the aligned region.

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