DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ret and Drl-2

DIOPT Version :10

Sequence 1:NP_477044.1 Gene:Ret / 43875 FlyBaseID:FBgn0011829 Length:1235 Species:Drosophila melanogaster
Sequence 2:NP_610835.2 Gene:Drl-2 / 36436 FlyBaseID:FBgn0033791 Length:648 Species:Drosophila melanogaster


Alignment Length:284 Identity:86/284 - (30%)
Similarity:141/284 - (49%) Gaps:17/284 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   771 LQLDTVLGEGEFGQVLKGFATEIAGLPGITTVAVKMLKKGSNSVEYMALLSEFQLLQEVSHPNVI 835
            |..:.::.||.||::..|...|..      ...||.:..|::..:...||.:..||..|||.:::
  Fly   381 LSYEELVKEGTFGRIYAGKLGESC------EALVKTVIDGASLTQVACLLQDASLLIGVSHQHIL 439

  Fly   836 KLLGACTSSEA-PLLIIEYARYGSLRSYLRLSRKIECAGVDFADGVEPVNVKMVLTFAWQICKGM 899
            ..|.|.|.... |.:...:...|:|:.||:.||:...|          ::.:.::.|...|.||:
  Fly   440 APLLANTELPGPPEIAYPHPSKGNLKMYLQKSRESSTA----------LSTRQLVEFGLHITKGL 494

  Fly   900 AYLSELKLVHRDLAARNVLLADGKICKISDFGLTRDVYEDDAYLKRSRDRVPVKWMAPESLADHV 964
            |||..|.:||:|:|.||..|.:....||.|..|:||::.||.......:..|:||::.|||...|
  Fly   495 AYLHSLGIVHKDIATRNCYLDEESYVKICDSALSRDLFPDDYDCLGDNENRPLKWLSLESLQKRV 559

  Fly   965 YTSKSDVWSFGVLCWELITLGASPYPGIAPQNLWSLLKTGYRMDRPENCSEAVYSIVRTCWADEP 1029
            |.::.|||:.||..|||:||...|:..:....|.:.|..|:|:::|.||.:..::::..||..|.
  Fly   560 YATQGDVWALGVTYWELVTLAQMPHEEVDIFELTNYLAAGFRLEQPVNCPDEFFTVMNCCWHCEA 624

  Fly  1030 NGRPSFKFLASEFEKLLGNNAKYI 1053
            ..||:...|.|..:....:...||
  Fly   625 KQRPTPSQLLSYLQDFHADLGMYI 648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RetNP_477044.1 Protein Kinases, catalytic domain 770..1049 CDD:473864 84/278 (30%)
Drl-2NP_610835.2 WIF 30..156 CDD:460414
PTK_Ryk 373..644 CDD:270639 84/278 (30%)
Blue background indicates that the domain is not in the aligned region.

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