Sequence 1: | NP_477044.1 | Gene: | Ret / 43875 | FlyBaseID: | FBgn0011829 | Length: | 1235 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_858048.2 | Gene: | ret / 30512 | ZFINID: | ZDB-GENE-980526-307 | Length: | 1106 | Species: | Danio rerio |
Alignment Length: | 1244 | Identity: | 365/1244 - (29%) |
---|---|---|---|
Similarity: | 561/1244 - (45%) | Gaps: | 262/1244 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MESTT-IVFVTLLTIITQRKHCAAVDVYFPTTSVKFNMPINEESESIFSKIPLAQFQVLRMEDNR 64
Fly 65 LASDYLYSLEQNPL----LRINSSSGEIYMR-----TDYRSPNSSATFLVTAFPRDQPDHELLNV 120
Fly 121 SHLSLEV----TPQPLEEYCS----------------------ELEHICFWSSAQYTIAESHGPY 159
Fly 160 RRKDFFEPVLIGALNSRAAKYLCPHVSLEYSLNAGSS-HFVL--KQNRLYTRQTLDHDELNGLNA 221
Fly 222 KAGQLQARITCTVKLSSRDQRKFSRILDIKLLDRNDNGPKLQESSSKFDFYLEQPYFQADEEA-- 284
Fly 285 GKKVIYVDKDTLEANAHLVY---AVHNDSHG-LFRPDC---HAYEADHTGRPH---------TIV 333
Fly 334 SCQLRFSRN-GVFRETPYCVSLEARDLTIVSRVDAMSATANVCYHINLSKLHESEQELPQALPLR 397
Fly 398 ARQHRIFESEEFNGDSAGRSLSPPTVDYDKDVSVYRSAASNFRVVQPDSFLDLMRLRSIRFDIVE 462
Fly 463 DKLGAFGITS-------TSGIVFVKNPQVLEEAPE--TIYFLNVTWIDQQRLSHVRVINVHLVHG 518
Fly 519 RPENTSCELKVKSRSQTCAQIKYQSQCVRYCGLATGGGSCQWRGSNSAMFGTRYGSCVPESRYCP 583
Fly 584 DHVCDPLEELNPMACPQDCTPAGRIVGPHSSNENKRGIYSASGTCICEDNGKCSCAPLDEEPKMK 648
Fly 649 KPRKRKNETEAEPLLGVRRGTPPNQPLQDPMLLGVLNVAGFECDRSCMFFVITCPLLFVLLLLCL 713
Fly 714 L---------------IAQRKMLQRRLGKQSMTTSS----KQALPESGGGDFALMPLQSGFRFES 759
Fly 760 GDAKWEFPREKLQLDTVLGEGEFGQVLKGFATEIAGLPGITTVAVKMLKKGSNSVEYMALLSEFQ 824
Fly 825 LLQEVSHPNVIKLLGACTSSEAPL-LIIEYARYGSLRSYLRLSRKI--ECAGVD------FADGV 880
Fly 881 EPVNVKM--VLTFAWQICKGMAYLSELKLVHRDLAARNVLLADGKICKISDFGLTRDVYEDDAYL 943
Fly 944 KRSRDRVPVKWMAPESLADHVYTSKSDVWSFGVLCWELITLGASPYPGIAPQNLWSLLKTGYRMD 1008
Fly 1009 RPENCSEAVYSIVRTCWADEPNGRPSFKFLASEFEKLLGNNAKYIDLETNAVSNPLYCGDDSALI 1073
Fly 1074 TTELGE------PESLQHLWSPPKIAYDIHDQATSYDQSEEEMPVTSTAPPGYDLPRPLLDATAN 1132
Fly 1133 GQVLRYEND 1141 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ret | NP_477044.1 | PKc_like | 770..1049 | CDD:304357 | 161/289 (56%) |
TyrKc | 771..1042 | CDD:197581 | 158/281 (56%) | ||
ret | NP_858048.2 | CA | 186..256 | CDD:214520 | 18/77 (23%) |
PTKc_RET | 715..1004 | CDD:173631 | 161/289 (56%) | ||
Pkinase_Tyr | 716..997 | CDD:285015 | 158/281 (56%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170580544 | |
Domainoid | 1 | 1.000 | 317 | 1.000 | Domainoid score | I1243 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 431 | 1.000 | Inparanoid score | I1696 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D153428at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0008389 | |
OrthoInspector | 1 | 1.000 | - | - | oto39002 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_108073 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR24416 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4355 |
SonicParanoid | 1 | 1.000 | - | - | X6379 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
12 | 11.930 |