DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ret and FYN

DIOPT Version :10

Sequence 1:NP_477044.1 Gene:Ret / 43875 FlyBaseID:FBgn0011829 Length:1235 Species:Drosophila melanogaster
Sequence 2:NP_002028.1 Gene:FYN / 2534 HGNCID:4037 Length:537 Species:Homo sapiens


Alignment Length:297 Identity:110/297 - (37%)
Similarity:167/297 - (56%) Gaps:27/297 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   749 MPLQSGFRFESGDAKWEFPREKLQLDTVLGEGEFGQVLKGFATEIAGLPGITTVAVKMLKKGSNS 813
            ||..:....::.|. ||.|||.|||...||.|:||:|..|...      |.|.||:|.||.|:.|
Human   250 MPRLTDLSVKTKDV-WEIPRESLQLIKRLGNGQFGEVWMGTWN------GNTKVAIKTLKPGTMS 307

  Fly   814 VEYMALLSEFQLLQEVSHPNVIKLLGACTSSEAPLLII-EYARYGSLRSYLRLSRKIECAGVDFA 877
            .|  :.|.|.|:::::.|..:::|....  ||.|:.|: ||...|||..:|:             
Human   308 PE--SFLEEAQIMKKLKHDKLVQLYAVV--SEEPIYIVTEYMNKGSLLDFLK------------- 355

  Fly   878 DGV-EPVNVKMVLTFAWQICKGMAYLSELKLVHRDLAARNVLLADGKICKISDFGLTRDVYEDDA 941
            ||. ..:.:..::..|.|:..||||:..:..:||||.:.|:|:.:|.||||:||||.| :.||:.
Human   356 DGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLAR-LIEDNE 419

  Fly   942 YLKRSRDRVPVKWMAPESLADHVYTSKSDVWSFGVLCWELITLGASPYPGIAPQNLWSLLKTGYR 1006
            |..|...:.|:||.|||:.....:|.||||||||:|..||:|.|..||||:..:.:...::.|||
Human   420 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYR 484

  Fly  1007 MDRPENCSEAVYSIVRTCWADEPNGRPSFKFLASEFE 1043
            |..|::|..:::.::..||..:|..||:|::|.|..|
Human   485 MPCPQDCPISLHELMIHCWKKDPEERPTFEYLQSFLE 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RetNP_477044.1 Protein Kinases, catalytic domain 770..1049 CDD:473864 102/276 (37%)
FYNNP_002028.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 14..35
SH3_Fyn_Yrk 85..140 CDD:212939
SH2_Src_Fyn_isoform_a_like 145..245 CDD:198281
PTKc_Fyn 261..534 CDD:270655 108/286 (38%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.