DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ret and Yes1

DIOPT Version :10

Sequence 1:NP_477044.1 Gene:Ret / 43875 FlyBaseID:FBgn0011829 Length:1235 Species:Drosophila melanogaster
Sequence 2:NP_001385513.1 Gene:Yes1 / 24884 RGDID:3977 Length:541 Species:Rattus norvegicus


Alignment Length:287 Identity:108/287 - (37%)
Similarity:164/287 - (57%) Gaps:26/287 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   760 GDAK--WEFPREKLQLDTVLGEGEFGQVLKGFATEIAGLPGITTVAVKMLKKGSNSVEYMALLSE 822
            |.||  ||.|||.|:|:..||:|.||:|..|...      |.|.||:|.||.|:...|  |.|.|
  Rat   262 GLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWN------GTTKVAIKTLKPGTMMPE--AFLQE 318

  Fly   823 FQLLQEVSHPNVIKLLGACTSSEAPLLII-EYARYGSLRSYLRLSRKIECAGVDFADGVEPVNVK 886
            .|:::::.|..::.|....  ||.|:.|: |:...|||..:|:           ..|| :.:.:.
  Rat   319 AQIMKKLRHDKLVPLYAVV--SEEPIYIVTEFMSKGSLLDFLK-----------EGDG-KYLKLP 369

  Fly   887 MVLTFAWQICKGMAYLSELKLVHRDLAARNVLLADGKICKISDFGLTRDVYEDDAYLKRSRDRVP 951
            .::..|.||..||||:..:..:||||.|.|:|:.:..:|||:||||.| :.||:.|..|...:.|
  Rat   370 QLVDMAAQIADGMAYIERMNYIHRDLRAANILVGENLVCKIADFGLAR-LIEDNEYTARQGAKFP 433

  Fly   952 VKWMAPESLADHVYTSKSDVWSFGVLCWELITLGASPYPGIAPQNLWSLLKTGYRMDRPENCSEA 1016
            :||.|||:.....:|.||||||||:|..||:|.|..||||:..:.:...::.||||..|:.|.|:
  Rat   434 IKWTAPEAALYGRFTIKSDVWSFGILQTELVTKGRVPYPGMVNREVLEQVERGYRMPCPQGCPES 498

  Fly  1017 VYSIVRTCWADEPNGRPSFKFLASEFE 1043
            ::.::..||..:|:.||:|:::.|..|
  Rat   499 LHELMNLCWKKDPDERPTFEYIQSFLE 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RetNP_477044.1 Protein Kinases, catalytic domain 770..1049 CDD:473864 100/275 (36%)
Yes1NP_001385513.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29
SH3_Yes 92..149 CDD:212940
SH2_Src_family 152..251 CDD:199827
PTKc_Yes 262..540 CDD:270654 108/287 (38%)
Blue background indicates that the domain is not in the aligned region.

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