DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ret and LOC1273258

DIOPT Version :10

Sequence 1:NP_477044.1 Gene:Ret / 43875 FlyBaseID:FBgn0011829 Length:1235 Species:Drosophila melanogaster
Sequence 2:XP_061507028.1 Gene:LOC1273258 / 1273258 VectorBaseID:AGAMI1_012797 Length:1261 Species:Anopheles gambiae


Alignment Length:553 Identity:146/553 - (26%)
Similarity:215/553 - (38%) Gaps:144/553 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   765 EFPREKLQLDTVLGEGEFGQVLKGFATEIAGLPGITTVAVKMLKKGSN-SVEYMALLSEFQLLQE 828
            |....:|.|..|:|.|.|.:|.:.|      |.| ..||||..::... .|....:|.|.:|...
Mosquito    97 EIQYHELDLKEVIGVGGFSKVHRAF------LNG-EEVAVKASRQDDEFEVARQNVLQEAKLFWS 154

  Fly   829 VSHPNVIKLLGACTSSEAPLLIIEYARYGSLRSYLRLSRKIECAGVDFADGVEPVNVKMVLTFAW 893
            :.|||::.|.|.|...:...|::||||.|||...| ..|||            |.||  ::.:|.
Mosquito   155 LKHPNIVSLKGVCLDPKTLCLVMEYARGGSLNKIL-AGRKI------------PPNV--LVDWAI 204

  Fly   894 QICKGMAYL---SELKLVHRDLAARNVLLAD--------GKICKISDFGLTRDVYEDDAYLKRSR 947
            ||.:||.||   :.:.::||||.:.|||:::        .|..||:||||.|:.|.    ..|..
Mosquito   205 QIARGMKYLHCEAPISVIHRDLKSSNVLISESIQHGHLLNKTLKITDFGLAREAYR----TTRMS 265

  Fly   948 DRVPVKWMAPESLADHVYTSKSDVWSFGVLCWELITLGASPYPGIAPQNLWSLLKTGY------- 1005
            ......||.||.:....|:..|||||:|||.|||:| |.:||.|      :..|...|       
Mosquito   266 AAGTFAWMPPEVIKSGTYSKASDVWSYGVLLWELLT-GETPYKG------FDSLSVAYGVAVNTL 323

  Fly  1006 RMDRPENCSEAVYSIVRTCWADEPNGRPSFKFLASEFEKLLGNNAKYIDLETNAVSNPLYCGDDS 1070
            .:..|:.|.|:...::::||..:|:.|||||    :.||         ||:..|.|.......:|
Mosquito   324 ALPIPKTCPESWGKLMKSCWEIDPHRRPSFK----DIEK---------DLDIIARSGFAQTPHES 375

  Fly  1071 ALITTELG----EPESLQHLWSPPKIAYDIHDQATSYDQS------------------EEEMPVT 1113
             ..|.:.|    ..|.||.|....|......::..|.::.                  |:|:...
Mosquito   376 -FHTMQDGWKKEIAEVLQELRKKEKAFKSFEEELRSKEEELTRVQQEQRYKEENLAKREQELHAR 439

  Fly  1114 STAPPGYDL--------PRP------------LLDATANGQVLRYENDLRFPLNIRKSSCTPSYS 1158
            .....|.:|        |.|            .|...|.||: ...:|.|..:.|:.::......
Mosquito   440 EIELLGRELKILINQNTPTPKKRKGKFSKSRIKLIKKAPGQI-SLPSDFRHTITIQHTAIRDERQ 503

  Fly  1159 NMTSEP--PAT------------------TSLPHYSVPVKRGRSYLDMTNKSLIPDNLDSREFEK 1203
            .:.:.|  |||                  .|..|     :|.||:|.....|..|     ::|.|
Mosquito   504 RIDTPPGSPATRLRTIVFPGDVIKGKTWGPSTLH-----QRERSHLPTMRPSARP-----QQFSK 558

  Fly  1204 HLSKTISFRFSSLLNLSETKEV-----SPGWQA 1231
            ........|.::|...|...|:     ...|.|
Mosquito   559 SAPNLDKSRATALSASSSRHEILDYDTDEAWYA 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RetNP_477044.1 Protein Kinases, catalytic domain 770..1049 CDD:473864 99/297 (33%)
LOC1273258XP_061507028.1 None

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