DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ret and fes

DIOPT Version :10

Sequence 1:NP_477044.1 Gene:Ret / 43875 FlyBaseID:FBgn0011829 Length:1235 Species:Drosophila melanogaster
Sequence 2:XP_002932286.2 Gene:fes / 100489191 XenbaseID:XB-GENE-6067138 Length:822 Species:Xenopus tropicalis


Alignment Length:903 Identity:215/903 - (23%)
Similarity:355/903 - (39%) Gaps:219/903 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 LDHDELNGLNAKAGQLQ---ARITCTVKLSSRDQRKFSRILD------IKLLDRNDNGPKLQESS 266
            |||....||:....||.   |.:....:..|:..||.|..|:      :.:|.|...  :|::|.
 Frog    58 LDHSPTPGLSEYTSQLNESWATLVSQTENLSQILRKHSEDLNSGPLNKLTILIREKQ--QLKKSY 120

  Fly   267 SKFDFYLEQPYFQADEEAGKKV--IYVD--KDTLEANAHLVYAVHNDSHGLFRPDCHAYEADHTG 327
            |:....|.|.|.:..::..:|:  .|..  |:||:            |...::..|...:.|...
 Frog   121 SEQWQLLNQDYIKTTQQDIEKLRSQYRSQVKETLQ------------SKRKYQEACRDKDRDKAK 173

  Fly   328 RPHTIVSCQLRFSRNGVFRETPYCVSLEARDLTIVSRVDAMSATANVCYH-----INLSKLHESE 387
            ..:...:.:|....|      .|.::::|..|                :|     .:|..||||.
 Frog   174 EKYVKNTWKLHALHN------QYVLAVKAAQL----------------HHEHHFLYSLPTLHESM 216

  Fly   388 QELPQALPLRARQHRIFESEEFNG-------------DSAGRSLSPPTVDYDKDVSVYRSAASNF 439
            |.:.|.: ::..::.:.|..|...             .||..|:| |..:||..:.:.||.:...
 Frog   217 QSIHQEM-VQILKNIMQEYSEITSLVQEEVASLHREIASAVNSIS-PFKEYDNFLQMNRSVSELP 279

  Fly   440 RVVQPDSFL-----DL--------MRLRSIRFDI--VEDKLGAF--GITSTSGIVFVKNPQVLEE 487
            .:|..|:.|     ||        :.:.|::..:  ||::|.:.  .|.....||......:..|
 Frog   280 PIVTFDTSLLEETDDLEEELQLNDLTVESVQHTLTSVEEELASVTAAIEGKQDIVKQLRSDIATE 344

  Fly   488 APETIYFLNVTWI-------DQQRLSHVRVINVHLVHGRPENTSCELKVKSRSQT--------CA 537
            ...|.....:..:       |.....|:.:.|.:.:||:.|      |:|.:..|        ..
 Frog   345 ERTTDCREKINLLAKRHALRDALLQYHMTLCNKNKIHGQRE------KLKRKMNTIGSGDPPPAL 403

  Fly   538 QIKYQSQCV----RYCGLATGGGSCQWRGSNSAMFGTRYGSCVPESRYCPDHVCDPLEELNPMAC 598
            |::..:|.:    |.||..|....   :...|.:|..:: |..|.....|| |..||.:.|   .
 Frog   404 QLQDDNQSISSVERECGKKTLENI---KNHISGIFRPKF-SLPPLLPLIPD-VQKPLSQQN---W 460

  Fly   599 PQDCTPAGRIVGPHSSNENKRGIYSASGTCICEDNGKCSCAPLDEEPKMKKPRKRKNETEAEPLL 663
            .....|...:.|                  :..:||....              |:::.:.|.:|
 Frog   461 YHGAIPRSEVQG------------------LLVNNGDFLI--------------RESQGKQEYVL 493

  Fly   664 GVR-RGTPPNQPLQDPMLLGVLNVAGFECDRSCMFFVITCPLLFVLLLLCLLIAQRKMLQRRLGK 727
            .|. .|.|.:..:|:......|...||.          |.|||....|..              |
 Frog   494 SVLWEGQPRHFIIQNVDNCYRLEGEGFS----------TIPLLIDHFLKT--------------K 534

  Fly   728 QSMTTSSKQALPESGGGDFALMPLQSGFRFESGDAKWEFPREKLQLDTVLGEGEFGQVLKGFATE 792
            |::|..|...|.::...|                 ||....|::.|...:|:|.||:|..|... 
 Frog   535 QAVTKKSGVILNKAVVKD-----------------KWVLEHEEVILGERIGKGNFGEVFSGRLR- 581

  Fly   793 IAGLPGITTVAVKMLKKGSNSVEYMALLSEFQLLQEVSHPNVIKLLGACTSSEAPLLIIEYARYG 857
                ...|.||||..:...........|.|.::|::.||||::||:|.||......:::|..:.|
 Frog   582 ----ADNTPVAVKSCRDTLPPDLKDKFLMEARILKQYSHPNIVKLIGVCTQKHPIYIVMELVQGG 642

  Fly   858 SLRSYLRLSRKIECAGVDFADGVEPVNVKMVLTFAWQICKGMAYLSELKLVHRDLAARNVLLADG 922
            ..:::||            .:|.: :.||.::..:.....||.||.....:||||||||.|:.:.
 Frog   643 DFQTFLR------------NEGPK-LKVKELIRMSENAAAGMEYLESKHCIHRDLAARNCLVTEK 694

  Fly   923 KICKISDFGLTRD----VYEDDAYLKRSRDRVPVKWMAPESLADHVYTSKSDVWSFGVLCWELIT 983
            .:.||||||::|:    ||.....:|    ::||||.|||:|....|:|:|||||||||.||..:
 Frog   695 NVLKISDFGMSREEEDGVYSSTGGMK----QIPVKWTAPEALNYGRYSSESDVWSFGVLLWEAFS 755

  Fly   984 LGASPYPGIAPQNLWSLLKTGYRMDRPENCSEAVYSIVRTCWADEPNGRPSFKFLASE 1041
            ||:.||..::.|....:::.|.|:..|:||.:.|||::..||..:|..||:|..:..|
 Frog   756 LGSVPYATMSNQQTREIIEQGIRLLVPDNCPDEVYSLMLRCWEYDPKKRPNFSTVHQE 813

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RetNP_477044.1 Protein Kinases, catalytic domain 770..1049 CDD:473864 95/276 (34%)
fesXP_002932286.2 F-BAR_Fes 7..243 CDD:153369 44/221 (20%)
SH2_Fps_family 453..537 CDD:198224 24/142 (17%)
PTKc_Fes 564..815 CDD:270667 94/272 (35%)

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