DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ret and mst1rb

DIOPT Version :10

Sequence 1:NP_477044.1 Gene:Ret / 43875 FlyBaseID:FBgn0011829 Length:1235 Species:Drosophila melanogaster
Sequence 2:XP_073773053.1 Gene:mst1rb / 100134855 ZFINID:ZDB-GENE-071218-3 Length:1374 Species:Danio rerio


Alignment Length:886 Identity:211/886 - (23%)
Similarity:324/886 - (36%) Gaps:275/886 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   375 CYHINLSKLHESEQE-LPQALPLRARQHRIFESEEFNGDSAGRSLSPPTVDYDKDVSVYRSAASN 438
            |.|: |.|:.....| |.:.|.:.|:.|        .|...|..    ::|...::..:.....|
Zfish   610 CTHL-LCKIRSGTIETLFKPLNVTAKVH--------EGQVEGHY----SIDGSAEMPGFTFVVPN 661

  Fly   439 FRVVQPD--------------SFLDLMRLRSIRFD----------IVEDKLGAF-----GITSTS 474
            ...||||              .:||..:.|.:..|          :....|.:.     .:|...
Zfish   662 ITEVQPDYGPVDGGTLITITGPYLDSGKNRKVTLDGESCPVQSVSVARGNLSSIVCLSQPVTEVK 726

  Fly   475 GIV-----------------FVKNPQVLEEAPE----------------------TIYFLNVTWI 500
            .:|                 :.|.|::|...|:                      .:||      
Zfish   727 DVVLRVYIDKSRVVTTKVFRYKKTPEILAVLPDCSFDSGSRIIIEGRNLDSVYRTVVYF------ 785

  Fly   501 DQQRLSHVRVINVHLVHGRPENTSCELKVKSRSQTC------------AQIKYQSQCVRYCGLAT 553
             |.:.||:          :|.:|.|..|.|.....|            .::.:....|  .||  
Zfish   786 -QPKESHL----------KPVSTECRGKAKPTRMECITPVFPRDETEEGELSFDMDGV--LGL-- 835

  Fly   554 GGGSCQWRGSNSAMFGTRYGSCVPES------RYCP--DHVCDPLEELNPMACPQDCTPAGRIVG 610
                  |:...|.   ..||..:|..      |..|  |.|....::||.::   .|......||
Zfish   836 ------WKHDFSY---HPYGRPIPFETEGHILRLYPGFDEVSLHHQKLNLVS---SCMSITMTVG 888

  Fly   611 PHSSNENKRGIYSASGTCICEDNGKCSCAPLDEEPKMKKPRKRKNETEAEPLLGVRRGTPPN--- 672
                                  :..|....||.|...:.|......:|..|:.....|...|   
Zfish   889 ----------------------DVDCGGKVLDNEITCRIPNNLTIPSEGLPVKVTVNGYTHNVGT 931

  Fly   673 -----QPLQDPMLLGVLNVAGFECDRSCMFFVITCPLLFVLLLLCLLIAQRKMLQ---------- 722
                 ......::||:|..            ::|..:| ..::|..|..|:|..|          
Zfish   932 VILVSNHYMVGIVLGILAA------------LVTGAVL-AFIVLKNLRKQKKASQTENRLSYFSH 983

  Fly   723 RRLGKQSMTTSS----KQALP-----------------ESGGGDFALMPLQ-------SGFRFES 759
            .|....|:..||    ::.||                 .:|..|..|.||.       :.||.|.
Zfish   984 SRSRSNSVDLSSLVDYRRDLPLTSITAPTGALAFPGLAYTGTLDTTLTPLMPPENISITSFRPEL 1048

  Fly   760 GDAKWE--FPREKLQL--DTVLGEGEFGQVLKGFAT-----EIAGLPGITTVAVKMLKKGSNSVE 815
            .:...:  .|...|::  ..::|:|.||.|..|:.|     ||       ..|||.|.:.::..|
Zfish  1049 LEEVKDVLIPASTLKVHHHQIIGKGHFGTVYHGYLTDHNNREI-------HCAVKSLNRITDVEE 1106

  Fly   816 YMALLSEFQLLQEVSHPNVIKLLGACTSSEA-PLLIIEYARYGSLRSYLRLSRKIECAGVDFADG 879
            ....|.|..|::...|.||:.|||.....|. ||:::.|.::|.||.::|...:           
Zfish  1107 VEQFLKEGILMKGFHHSNVLSLLGILLPEEGLPLVVLPYMKHGDLRHFIRCENR----------- 1160

  Fly   880 VEPVNVKMVLTFAWQICKGMAYLSELKLVHRDLAARNVLLADGKICKISDFGLTRDVYEDDAYLK 944
             .| .||.::.|..|:.|||.||::.|.|||||||||.:|.:....|::|||:.|||.|.:.|..
Zfish  1161 -NP-TVKDLIGFGLQVAKGMEYLAQKKFVHRDLAARNCMLDESYTVKVADFGMARDVLEKEYYSV 1223

  Fly   945 RS--RDRVPVKWMAPESLADHVYTSKSDVWSFGVLCWELITLGASPYPGIAPQNLWSLLKTGYRM 1007
            :.  :.::||||||.|||....:|:||||||||||.||::|.||||||.:.|.::...|..|.|:
Zfish  1224 QDHRKAKLPVKWMAIESLQTQKFTTKSDVWSFGVLMWEMLTRGASPYPEVDPYDVTHFLLKGRRL 1288

  Fly  1008 DRPENCSEAVYSIVRTCWADEPNGRPSFKFLASEFEKLLGN--NAKYIDLETNAVSNPLYCGDDS 1070
            .:|:.|.:.:::|:..||..:|..||||..|.|....:|.:  ...||.|:...|:         
Zfish  1289 PQPQYCPDPLFAILLQCWDPDPEKRPSFSTLVSAVMSILSSLEGEHYISLKVTYVN--------- 1344

  Fly  1071 ALITTELGEPESLQHLWSPPKIAYDIHDQATSYDQSEEEMP 1111
                  |.:|.....|          .|.|..||.|:.:.|
Zfish  1345 ------LDQPRPYPAL----------TDSADEYDSSDADEP 1369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RetNP_477044.1 Protein Kinases, catalytic domain 770..1049 CDD:473864 108/290 (37%)
mst1rbXP_073773053.1 None

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