| Sequence 1: | NP_477044.1 | Gene: | Ret / 43875 | FlyBaseID: | FBgn0011829 | Length: | 1235 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001096290.1 | Gene: | pdgfra / 100124862 | XenbaseID: | XB-GENE-6072920 | Length: | 1091 | Species: | Xenopus tropicalis |
| Alignment Length: | 672 | Identity: | 187/672 - (27%) |
|---|---|---|---|
| Similarity: | 291/672 - (43%) | Gaps: | 180/672 - (26%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 629 ICEDNGKCSCAPL-------DEEPKMKKPRKRKNETEA-------EPLLGVR------RGTPPNQ 673
Fly 674 -PLQDPMLLGVLNVAGFECDRSCMFFVITCPLLFVLLLLCLLIAQRKMLQRRLGKQSMTTSSKQA 737
Fly 738 LPES---GGGDFALM-PLQSGFRFESGDAKWEFPREKLQLDTVLGEGEFGQVLKGFATEIAGLPG 798
Fly 799 ITTVAVKMLKKGSNSVEYMALLSEFQLLQEV-SHPNVIKLLGACTSSEAPLLIIEYARYGSLRSY 862
Fly 863 LRLSR-------------KIECAGV---------------------------------------- 874
Fly 875 --------------------------------DFADGVEPVNVKMVLTFAWQICKGMAYLSELKL 907
Fly 908 VHRDLAARNVLLADGKICKISDFGLTRDVYEDDAYLKRSRDRVPVKWMAPESLADHVYTSKSDVW 972
Fly 973 SFGVLCWELITLGASPYPG-IAPQNLWSLLKTGYRMDRPENCSEAVYSIVRTCWADEPNGRPSFK 1036
Fly 1037 FLASEFEKLLGNNAK---------YIDLETNAVSNPLYCGDDSALITTELGEPESLQHLWSPPKI 1092
Fly 1093 AYDIHDQATSYDQSEEEMPVTSTAPPGYDLPRPLLDATANGQVLRYENDLRFPLNIRKSSCTPSY 1157
Fly 1158 SNMTSEPPATTSLPHYSVPVKR 1179 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Ret | NP_477044.1 | PKc_like | 770..1049 | CDD:304357 | 128/365 (35%) |
| TyrKc | 771..1042 | CDD:197581 | 125/357 (35%) | ||
| pdgfra | NP_001096290.1 | Ig_3 | 29..101 | CDD:404760 | |
| Ig | 215..313 | CDD:416386 | |||
| Ig strand A | 215..219 | CDD:409353 | |||
| Ig strand A' | 226..230 | CDD:409353 | |||
| Ig strand B | 232..241 | CDD:409353 | |||
| Ig strand C | 246..251 | CDD:409353 | |||
| Ig strand C' | 254..256 | CDD:409353 | |||
| Ig strand D | 260..268 | CDD:409353 | |||
| Ig strand E | 272..280 | CDD:409353 | |||
| Ig strand F | 290..296 | CDD:409353 | |||
| Ig strand G | 301..307 | CDD:409353 | |||
| Ig | 316..416 | CDD:416386 | |||
| PTKc_PDGFR_alpha | 558..960 | CDD:173653 | 138/406 (34%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 1.000 | |||||