DRSC/TRiP Functional Genomics Resources

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Protein Alignment ras and AT1G16350

DIOPT Version :9

Sequence 1:NP_001356940.1 Gene:ras / 43873 FlyBaseID:FBgn0003204 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_173085.1 Gene:AT1G16350 / 838204 AraportID:AT1G16350 Length:502 Species:Arabidopsis thaliana


Alignment Length:516 Identity:248/516 - (48%)
Similarity:340/516 - (65%) Gaps:23/516 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 TGFDAELQDGLSCKELFQNGEGLTYNDFLILPGYIDFTAEEVDLSSPLTKSLTLRAPLVSSPMDT 94
            :||    :||.|.::||..|...||:|.:.||.:|||:.:.|.||:.|:|.:.|..|.|:|||||
plant     2 SGF----EDGFSAEKLFSQGYSYTYDDVIFLPHFIDFSTDAVSLSTRLSKRVPLSIPCVASPMDT 62

  Fly    95 VTESEMAIAMALCGGIGIIHHNCTPEYQALEVHKVKKYKHGFMRDPSVMSPTNTVGDVLEARRKN 159
            |:||.||.|||..|||||:|:||..:.||..:...|..:.....|.....|.:.:|.|.:.    
plant    63 VSESHMAAAMAALGGIGIVHYNCDIDTQASVIRHAKSLQVPIASDAVFKCPEHQIGSVDDF---- 123

  Fly   160 GFTGYP-VTENGKLGGKLLGMVTSRD-IDFRENQPEVLLADIMTT---ELVTAPNGINLPTANAI 219
            |.:.:. |::.|.|..||||.|:..: ...:::|.||.:.|.|.:   :....|..|:|....|:
plant   124 GPSSFVFVSQTGTLTPKLLGYVSKSEWSSMKDDQKEVKIYDYMKSCENKDYYVPWDIDLDKIEAV 188

  Fly   220 LEKSKKGKLPIVNQAGELVAMIARTDLKKARSYP---NASKDSNKQLLVGAAIGTRSEDKARLAL 281
            ||..:|| ..::.:.||.|.::.:.|:::.:.||   :.:..::|:.:||||||||..||.||..
plant   189 LEDKQKG-FVVLEKEGETVNVVTKDDVERVKGYPKLGSGTVGADKKWMVGAAIGTRESDKERLEH 252

  Fly   282 LVANGVDVIILDSSQGNSVYQVEMIKYIKETYPELQVIGGNVVTRAQAKNLIDAGVDGLRVGMGS 346
            ||..|.:|::||||||||:||:|||||:|.|||||.|:||||||..||:|||.||||||||||||
plant   253 LVKAGANVVVLDSSQGNSIYQLEMIKYVKNTYPELDVVGGNVVTMYQAENLIKAGVDGLRVGMGS 317

  Fly   347 GSICITQEVMACGCPQATAVYQVSTYARQFGVPVIADGGIQSIGHIVKAIALGASAVMMGSLLAG 411
            ||||.||||.|.|..||||||:|||.|.|.||||||||||.:.||||||:.||||.|||||.|||
plant   318 GSICTTQEVCAVGRGQATAVYKVSTLAAQHGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAG 382

  Fly   412 TSEAPGEYFFSDGVRLKKYRGMGSLEAMERGDAKGAAMSRYYHNEMDKMKVAQGVSGSIVDKGSV 476
            ::||||.|.:.:|.|:||||||||||||.:|.      .:.|..:..|:|:||||.|::.|||||
plant   383 STEAPGAYEYRNGRRVKKYRGMGSLEAMTKGS------DQRYLGDTAKLKIAQGVVGAVADKGSV 441

  Fly   477 LRYLPYLECGLQHSCQDIGANSINKLRDMIYNGQLRFMKRTHSAQLEGNVHGLFSYEKRLF 537
            |:::||....::...||:||:|:....:::.:..||...||.:||:||.:|||.||||:.|
plant   442 LKFIPYTMHAVKQGFQDLGASSLQSAHELLRDNTLRLEARTGAAQIEGGIHGLVSYEKKSF 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rasNP_001356940.1 PTZ00314 38..533 CDD:240355 242/502 (48%)
AT1G16350NP_173085.1 PLN02274 1..502 CDD:215154 247/514 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 421 1.000 Domainoid score I121
eggNOG 1 0.900 - - E1_COG0516
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H68096
Inparanoid 1 1.050 447 1.000 Inparanoid score I395
OMA 1 1.010 - - QHG62889
OrthoDB 1 1.010 - - D618077at2759
OrthoFinder 1 1.000 - - FOG0001014
OrthoInspector 1 1.000 - - otm3310
orthoMCL 1 0.900 - - OOG6_100534
Panther 1 1.100 - - LDO PTHR11911
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X605
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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