DRSC/TRiP Functional Genomics Resources

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Protein Alignment ras and impdh1a

DIOPT Version :9

Sequence 1:NP_001356940.1 Gene:ras / 43873 FlyBaseID:FBgn0003204 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_005159064.1 Gene:impdh1a / 431724 ZFINID:ZDB-GENE-040704-15 Length:624 Species:Danio rerio


Alignment Length:536 Identity:360/536 - (67%)
Similarity:431/536 - (80%) Gaps:18/536 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 TGFDAELQDGLSCKELFQNGEGLTYNDFLILPGYIDFTAEEVDLSSPLTKSLTLRAPLVSSPMDT 94
            ||:..|  |||:.::||..|:||||||||||||:|||.::||||:|.||:.:||:.||:||||||
Zfish    90 TGYVPE--DGLTAQQLFAIGDGLTYNDFLILPGFIDFISDEVDLTSALTRKITLKTPLISSPMDT 152

  Fly    95 VTESEMAIAMALCGGIGIIHHNCTPEYQALEVHKVKKYKHGFMRDPSVMSPTNTVGDVLEARRKN 159
            ||||.|||||||.|||||||||||||:||.||.||||::.||:.||.||||.:|||||.||:.::
Zfish   153 VTESSMAIAMALMGGIGIIHHNCTPEFQANEVRKVKKFEQGFITDPVVMSPRHTVGDVFEAKVRH 217

  Fly   160 GFTGYPVTENGKLGGKLLGMVTSRDIDF-RENQPEVLLADIMT--TELVTAPNGINLPTANAILE 221
            ||:|.||||.||:|.||:|:|||||||| .|...:..|.:.||  .:||.||.|:.|..||.||:
Zfish   218 GFSGIPVTETGKMGSKLVGIVTSRDIDFLSEKDYDRPLEESMTKREDLVVAPAGVTLKEANDILQ 282

  Fly   222 KSKKGKLPIVNQAGELVAMIARTDLKKARSYPNASKDSNKQLLVGAAIGTRSEDKARLALLVANG 286
            :||||||||||.:.||||:||||||||.|.||.|||||.||||.|||||||.:||.||.||:..|
Zfish   283 RSKKGKLPIVNDSDELVAIIARTDLKKNRDYPLASKDSRKQLLCGAAIGTREDDKYRLDLLMQAG 347

  Fly   287 VDVIILDSSQGNSVYQVEMIKYIKETYPELQVIGGNVVTRAQAKNLIDAGVDGLRVGMGSGSICI 351
            ||||:|||||||||:|:.||.|||:.||||||:||||||.||||||||||||.||||||.|||||
Zfish   348 VDVIVLDSSQGNSVFQISMINYIKQKYPELQVVGGNVVTAAQAKNLIDAGVDALRVGMGCGSICI 412

  Fly   352 TQEVMACGCPQATAVYQVSTYARQFGVPVIADGGIQSIGHIVKAIALGASAVMMGSLLAGTSEAP 416
            ||||||||.||.|:||:|:.|||:||||||||||||::||:|||:|||||.||||||||.|:|||
Zfish   413 TQEVMACGRPQGTSVYKVAEYARRFGVPVIADGGIQTVGHVVKALALGASTVMMGSLLAATTEAP 477

  Fly   417 GEYFFSDGVRLKKYRGMGSLEAMERGDAKGAAMSRYYHNEMDKMKVAQGVSGSIVDKGSVLRYLP 481
            ||||||||||||||||||||:|||:.:   ::..||: :|.||:|||||||||:.||||:.:::|
Zfish   478 GEYFFSDGVRLKKYRGMGSLDAMEKNN---SSQKRYF-SEGDKVKVAQGVSGSVQDKGSIHKFVP 538

  Fly   482 YLECGLQHSCQDIGANSINKLRDMIYNGQLRFMKRTHSAQLEGNVHGLFSYEKRLFXHTTMAATE 546
            ||..|:||.||||||.|::.||.|:|:|:|:|.|||.|||:||.||||.||....|  |.....|
Zfish   539 YLIAGIQHGCQDIGAKSLSILRSMMYSGELKFEKRTMSAQVEGGVHGLHSYSFLPF--TRNGYIE 601

  Fly   547 TGSGG-------VPAP 555
            .||.|       ||:|
Zfish   602 PGSRGHPRAGPNVPSP 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rasNP_001356940.1 PTZ00314 38..533 CDD:240355 347/497 (70%)
impdh1aXP_005159064.1 PTZ00314 94..590 CDD:240355 348/501 (69%)
IMPDH 109..573 CDD:238223 328/467 (70%)
CBS_pair_IMPDH_2 195..310 CDD:239975 69/114 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581397
Domainoid 1 1.000 666 1.000 Domainoid score I144
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H68096
Inparanoid 1 1.050 695 1.000 Inparanoid score I660
OMA 1 1.010 - - QHG62889
OrthoDB 1 1.010 - - D281746at33208
OrthoFinder 1 1.000 - - FOG0001014
OrthoInspector 1 1.000 - - otm25939
orthoMCL 1 0.900 - - OOG6_100534
Panther 1 1.100 - - O PTHR11911
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R605
SonicParanoid 1 1.000 - - X605
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.900

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