DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ras and impdh1b

DIOPT Version :10

Sequence 1:NP_001356940.1 Gene:ras / 43873 FlyBaseID:FBgn0003204 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_005164774.1 Gene:impdh1b / 338306 ZFINID:ZDB-GENE-030219-206 Length:603 Species:Danio rerio


Alignment Length:505 Identity:348/505 - (68%)
Similarity:420/505 - (83%) Gaps:7/505 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 LQDGLSCKELFQNGEGLTYNDFLILPGYIDFTAEEVDLSSPLTKSLTLRAPLVSSPMDTVTESEM 100
            ::||.:.:|||..|:|:||||||||||:||||::||||:|.|||.:||:.||:||||||||||.|
Zfish   103 VRDGHTAEELFSKGDGMTYNDFLILPGFIDFTSDEVDLTSALTKKITLKTPLISSPMDTVTESSM 167

  Fly   101 AIAMALCGGIGIIHHNCTPEYQALEVHKVKKYKHGFMRDPSVMSPTNTVGDVLEARRKNGFTGYP 165
            ||||||.|||||||||||||:||.||.|||:::.||:.||.|:||.:||||||||:.::||:|.|
Zfish   168 AIAMALMGGIGIIHHNCTPEFQANEVRKVKRFEQGFITDPVVLSPHHTVGDVLEAKVRHGFSGIP 232

  Fly   166 VTENGKLGGKLLGMVTSRDIDF-RENQPEVLLADIMT--TELVTAPNGINLPTANAILEKSKKGK 227
            :||.||:|.||:|:|||||||| .|......|.:.||  .:||.||.|:.|..||.||::|||||
Zfish   233 ITETGKMGSKLVGIVTSRDIDFLSEKDNNKYLEEAMTKREDLVVAPAGVTLKEANDILQRSKKGK 297

  Fly   228 LPIVNQAGELVAMIARTDLKKARSYPNASKDSNKQLLVGAAIGTRSEDKARLALLVANGVDVIIL 292
            |||||...||||:||||||||.|.||.|||||.||||.|||||||.:||.||.||..:|||:::|
Zfish   298 LPIVNDKDELVAIIARTDLKKNRDYPLASKDSRKQLLCGAAIGTREDDKYRLDLLTQSGVDMVVL 362

  Fly   293 DSSQGNSVYQVEMIKYIKETYPELQVIGGNVVTRAQAKNLIDAGVDGLRVGMGSGSICITQEVMA 357
            ||||||||||:.||.|||:.||||||:||||||.||||||||||||.||||||.|||||||||||
Zfish   363 DSSQGNSVYQINMIHYIKQKYPELQVVGGNVVTAAQAKNLIDAGVDALRVGMGCGSICITQEVMA 427

  Fly   358 CGCPQATAVYQVSTYARQFGVPVIADGGIQSIGHIVKAIALGASAVMMGSLLAGTSEAPGEYFFS 422
            ||.||.|:||:|:.|||:||||||||||||::||:|||::||||.||||||||.|:|||||||||
Zfish   428 CGRPQGTSVYKVAEYARRFGVPVIADGGIQTVGHVVKALSLGASTVMMGSLLAATTEAPGEYFFS 492

  Fly   423 DGVRLKKYRGMGSLEAMERGDAKGAAMSRYYHNEMDKMKVAQGVSGSIVDKGSVLRYLPYLECGL 487
            ||||||||||||||:|||    |..:..:.|.:|.||:|||||||||:.||||:.:::|||..|:
Zfish   493 DGVRLKKYRGMGSLDAME----KNTSSQKRYFSEGDKVKVAQGVSGSVQDKGSIHKFVPYLIAGI 553

  Fly   488 QHSCQDIGANSINKLRDMIYNGQLRFMKRTHSAQLEGNVHGLFSYEKRLF 537
            ||.||||||.|::.||.|:|:|:|:|.|||.|||:||.||||.|:||||:
Zfish   554 QHGCQDIGAKSLSVLRSMMYSGELKFEKRTMSAQVEGGVHGLHSFEKRLY 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rasNP_001356940.1 PTZ00314 38..533 CDD:240355 344/497 (69%)
impdh1bXP_005164774.1 PTZ00314 104..599 CDD:240355 344/498 (69%)

Return to query results.
Submit another query.