DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ras and impdh2

DIOPT Version :9

Sequence 1:NP_001356940.1 Gene:ras / 43873 FlyBaseID:FBgn0003204 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_021333858.1 Gene:impdh2 / 317745 ZFINID:ZDB-GENE-030114-5 Length:558 Species:Danio rerio


Alignment Length:555 Identity:347/555 - (62%)
Similarity:428/555 - (77%) Gaps:53/555 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 TGFDAELQDGLSCKELFQNGEGLTYNDFLILPGYIDFTAEEVDLSSPLTKSLTLRAPLVSSPMDT 94
            ||:..:  |||:.::||.:|:||||||||||||||||||::|||:|.|||.:|::.||:||||||
Zfish    10 TGYVPD--DGLTGQQLFNSGDGLTYNDFLILPGYIDFTADQVDLTSALTKQITMKTPLISSPMDT 72

  Fly    95 VTESEMAIAMALCGGIGIIHHNCTPEYQALEVHKVKKYKHGFMRDPSVMSPTNTVGDVLEARRKN 159
            ||||.|||||||.||||.||||||||:||.||.|||:|:.||:.||.||||...|.||.:|:.::
Zfish    73 VTESGMAIAMALTGGIGFIHHNCTPEFQANEVRKVKRYEQGFITDPVVMSPNERVRDVFQAKARH 137

  Fly   160 GFTGYPVTENGKLGGKLLGMVTSRDIDF-RENQPEVLLADIMT--TELVTAPNGINLPTANAILE 221
            ||.|.|:|:||::||:|:|:::|||||| :|::.::.|:::||  .:||.||.|:.|..||.||:
Zfish   138 GFCGIPITDNGQMGGRLVGIISSRDIDFLKESEHDLPLSEVMTKREDLVVAPAGVTLKEANEILQ 202

  Fly   222 KSKK--------------------GKLPIVNQAGELVAMIARTDLKKARSYPNASKDSNKQLLVG 266
            :|||                    |||||||:.|.|||:||||||||.|.:|.|||||.||||.|
Zfish   203 RSKKDEIYSCGGKTEFSAVITPFSGKLPIVNEEGCLVAIIARTDLKKNRDFPLASKDSRKQLLCG 267

  Fly   267 AAIGTRSEDKARLALLVANGVDVIILDSSQGNSVYQVEMIKYIKETYPELQVIGGNVVTRAQAKN 331
            |||||.::||.||.||...||||::||||||||::|:.|||||||.||.:|||||||||.|||||
Zfish   268 AAIGTHNDDKYRLDLLAQAGVDVVVLDSSQGNSIFQINMIKYIKEKYPNVQVIGGNVVTAAQAKN 332

  Fly   332 LIDAGVDGLRVGMGSGSICITQE------------------------VMACGCPQATAVYQVSTY 372
            |||||.|.|||||||||||||||                        ::|||.|||||||:||.|
Zfish   333 LIDAGADALRVGMGSGSICITQEAPLSIPPGIKLHSPKTPTTVTGYSMLACGRPQATAVYKVSEY 397

  Fly   373 ARQFGVPVIADGGIQSIGHIVKAIALGASAVMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLE 437
            ||:||||||||||||::|||.||:|||||.||||||||.|||||||||||||:|||||||||||:
Zfish   398 ARRFGVPVIADGGIQTVGHIAKALALGASTVMMGSLLAATSEAPGEYFFSDGIRLKKYRGMGSLD 462

  Fly   438 AMERGDAKGAAMSRYYHNEMDKMKVAQGVSGSIVDKGSVLRYLPYLECGLQHSCQDIGANSINKL 502
            ||   |....:.:||: :|.||:||||||||::.||||:.:::|||..|:|||||||||.|:.:|
Zfish   463 AM---DKNLGSQTRYF-SESDKIKVAQGVSGAVQDKGSIHKFVPYLLVGIQHSCQDIGAKSLTQL 523

  Fly   503 RDMIYNGQLRFMKRTHSAQLEGNVHGLFSYEKRLF 537
            |.|:|:|:|||.|||.|||:||.||.|.|||||||
Zfish   524 RAMMYSGELRFEKRTMSAQMEGGVHSLHSYEKRLF 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rasNP_001356940.1 PTZ00314 38..533 CDD:240355 339/541 (63%)
impdh2XP_021333858.1 PTZ00314 16..554 CDD:240355 339/541 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 666 1.000 Domainoid score I144
eggNOG 1 0.900 - - E1_COG0516
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 695 1.000 Inparanoid score I660
OMA 1 1.010 - - QHG62889
OrthoDB 1 1.010 - - D281746at33208
OrthoFinder 1 1.000 - - FOG0001014
OrthoInspector 1 1.000 - - otm25939
orthoMCL 1 0.900 - - OOG6_100534
Panther 1 1.100 - - LDO PTHR11911
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R605
SonicParanoid 1 1.000 - - X605
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.870

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