DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ppn and adamts6

DIOPT Version :9

Sequence 1:NP_788752.2 Gene:Ppn / 43872 FlyBaseID:FBgn0003137 Length:2898 Species:Drosophila melanogaster
Sequence 2:XP_017213499.1 Gene:adamts6 / 569099 ZFINID:ZDB-GENE-091113-9 Length:1116 Species:Danio rerio


Alignment Length:615 Identity:207/615 - (33%)
Similarity:296/615 - (48%) Gaps:99/615 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 WTPWSSPSDCSRTCGGGVSYQTREC-LRRDDRGEAVCSGGSRRYFSCNTQDCPEEESDFRAQQCS 123
            |.||:...:||||||||||...|.| ......|...|.|..:||.||||..|||...|||.:||:
Zfish   560 WGPWTVWGECSRTCGGGVSSSMRHCDSPAPSGGGKYCLGERKRYRSCNTDACPEGSRDFREKQCA 624

  Fly   124 RFDRQQFDGVFYEWVPYT-NAPNPCELNCMPKGERFYYRQREKVVDGTRCNDKDLDVCVNGECMP 187
            .||...|.|.:|.|.||| ....||.|||:.:|..||..:...|:|||||....||:|:||||..
Zfish   625 DFDSLPFRGKYYNWKPYTGGGVKPCALNCLAEGYNFYTERSPAVIDGTRCQGDSLDICINGECKH 689

  Fly   188 VGCDMMLGSDAKEDKCRKCGGDGSTCKTIRNTITTKDLAPGYNDLLLLPEGATNIRIEETVPSSN 252
            ||||.:||||||||:||.||||||||:.............||.:::.:|:|:.:|.|.|...|.|
Zfish   690 VGCDNILGSDAKEDRCRVCGGDGSTCELTEGLFNDSLPRGGYMEVVQIPKGSVHIEIREVAVSKN 754

  Fly   253 YLACRNHSGHYYLNGDWRIDFPRPMFFANSWWNYQRKPMGFAAPDQLTCSGPISESLFIVMLVQE 317
            |:|.::....||:||.|.||:||....|.:.::|:|..   ..|:.|...|...|:|.:::|:||
Zfish   755 YIALKSEGDDYYINGAWTIDWPRKFDIAGTAFHYKRPT---DEPESLEALGATMENLVVMVLLQE 816

  Fly   318 KNISLDYEYSIP--ESLSHSQQDTHTWTHHQFNACSASCGGGSQSRKVTCNNRITLAEVNPSLCD 380
            :|:.:.|::::|  .:.|...:...:|.|..::.|||:|.||||.::|.|......:.|..|.||
Zfish   817 QNLGIQYKFNVPIQRTGSGDNEVGFSWHHLPWSECSATCAGGSQKQEVVCKRLDDNSVVQNSYCD 881

  Fly   381 QKSKPV-EEQACGTEPCAPHWVEGEWSKCSKGCGSDGFQNRSITCERISSSGEHTVEEDAVCLKE 444
            |.|||. .::.|.||||.|.|..|:||:|.|.| ..|.:.|::.|.|..:..|....||:.||. 
Zfish   882 QDSKPPGNQRRCNTEPCPPEWFIGDWSECGKTC-DGGIRTRTVLCIRKINPAEEETLEDSHCLT- 944

  Fly   445 VGNKPATKQECNRDVKNCPKYHLGPWTPCDKLCGDGKQTRKVTCFIEENGHKRVLPEEDCVEEKP 509
              ::|..::.||.  ::||                                             |
Zfish   945 --HRPIEQESCNN--QSCP---------------------------------------------P 960

  Fly   510 ETEKSCLLTPCEGVDWIISQWSGCN-ACGQNTETRTAICGNKE-GKVYPEEFC-EPEVPTLSRPC 571
            :              |:...||.|. .||...:.|..:|.:.: .|.:|...| :...|.:...|
Zfish   961 Q--------------WVTLDWSECTPKCGPGFKHRIVLCKSSDLTKTFPAALCSDHSKPPVRIRC 1011

  Fly   572 KSPKC-EAQWFSSEWSKCSAPCGKGVKSRIVICGEFDGKTVTPADDDSKCNKETKPESEQDCEGE 635
            ...:| ..:|...||.:|||.||.|.:.|.|.|..:.|:      ..|:|....:|.:.|.||  
Zfish  1012 SLGRCPPPRWIPGEWGQCSAQCGLGQQMRTVQCLSYTGQ------PSSECLDSLRPNTMQQCE-- 1068

  Fly   636 EKVCPGEWFTGPWGKC-SKPCGGGERVREV 664
                         .|| |.|..||:..::|
Zfish  1069 -------------SKCDSTPISGGDECKDV 1085

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpnNP_788752.2 TSP1 60..111 CDD:214559 24/51 (47%)
ADAM_spacer1 214..329 CDD:283607 33/114 (29%)
TSP1 468..521 CDD:214559 1/52 (2%)
TSP_1 645..693 CDD:278517 7/21 (33%)
Kunitz_BPTI 1611..1663 CDD:278443
Kunitz_BPTI 1670..1721 CDD:278443
Kunitz_BPTI 1729..1781 CDD:278443
Kunitz_BPTI 1789..1840 CDD:278443
Kunitz_BPTI 1848..1899 CDD:278443
KU 1920..1973 CDD:238057
Kunitz_BPTI 2001..2051 CDD:278443
KU 2071..2121 CDD:238057
Kunitz_BPTI 2127..2178 CDD:278443
KU 2192..2245 CDD:238057
KU 2251..2304 CDD:238057
KU 2316..2372 CDD:238057
WAP 2457..2497 CDD:278522
Ig 2521..2610 CDD:299845
IG_like 2530..2610 CDD:214653
IG_like 2627..2703 CDD:214653
Ig 2636..2701 CDD:143165
IG_like 2766..2841 CDD:214653
Ig 2768..2830 CDD:299845
PLAC 2851..2883 CDD:285849
adamts6XP_017213499.1 Pep_M12B_propep 40..187 CDD:307618
ZnMc_ADAMTS_like 249..464 CDD:239801
TSP1 560..612 CDD:214559 24/51 (47%)
ADAM_spacer1 719..828 CDD:310520 33/111 (30%)
TSP1 847..899 CDD:214559 22/51 (43%)
TSP1 901..959 CDD:214559 19/63 (30%)
TSP1 1021..1068 CDD:214559 17/52 (33%)
PLAC 1082..1114 CDD:312271 1/4 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 136 1.000 Domainoid score I4872
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2734
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.940

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