DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ppn and Adamts6

DIOPT Version :10

Sequence 1:NP_788752.2 Gene:Ppn / 43872 FlyBaseID:FBgn0003137 Length:2898 Species:Drosophila melanogaster
Sequence 2:NP_001102014.2 Gene:Adamts6 / 361886 RGDID:1307678 Length:1117 Species:Rattus norvegicus


Alignment Length:666 Identity:218/666 - (32%)
Similarity:310/666 - (46%) Gaps:149/666 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 WTPWSSPSDCSRTCGGGVSYQTREC-LRRDDRGEAVCSGGSRRYFSCNTQDCPEEESDFRAQQCS 123
            |..||...:||||||||||...|.| ......|...|.|..:||.||||..||....|||.:||:
  Rat   561 WGSWSLWGECSRTCGGGVSSSLRHCDSPAPSGGGKYCLGERKRYRSCNTDPCPLGSRDFREKQCA 625

  Fly   124 RFDRQQFDGVFYEWVPYT-NAPNPCELNCMPKGERFYYRQREKVVDGTRCNDKDLDVCVNGECMP 187
            .||...|.|..|.|.||| ....||.|||:.:|..||..:...|:|||:||...||:|:||||..
  Rat   626 DFDSMPFRGKHYNWKPYTGGGVKPCALNCLAEGYNFYTERAPAVIDGTQCNADSLDICINGECKH 690

  Fly   188 VGCDMMLGSDAKEDKCRKCGGDGSTCKTIRNTITTKDLAPGYNDLLLLPEGATNIRIEETVPSSN 252
            ||||.:|||||:||:||.||||||||..|...........||.:::.:|.|:.:|.:.|...|.|
  Rat   691 VGCDNILGSDAREDRCRVCGGDGSTCDAIEGFFNDSLPRGGYLEVVQIPRGSVHIEVREVSMSKN 755

  Fly   253 YLACRNHSGHYYLNGDWRIDFPRPMFFANSWWNYQRKPMGFAAPDQLTCSGPISESLFIVMLVQE 317
            |:|.::....||:||.|.||:||....:.:.::|:|..   ..|:.|...||.||:|.:::|:||
  Rat   756 YIALKSEGDDYYINGAWTIDWPRKFDVSGTAFHYKRPT---DEPESLEALGPTSENLIVMVLLQE 817

  Fly   318 KNISLDYEYSIP--ESLSHSQQDTHTWTHHQFNACSASCGGGSQSRKVTCNNRITLAEVNPSLCD 380
            :|:.:.|::::|  .:.|...:....|||..:..|||:|.||.|.::|.|......:.|..:.||
  Rat   818 QNLGIRYKFNVPIVRTGSGDNEVGFMWTHQPWAECSATCAGGVQKQEVVCKRLDDNSIVQNNFCD 882

  Fly   381 QKSKPVEEQ-ACGTEPCAPHWVEGEWSKCSKGCGSDGFQNRSITCERISSSGEHTVEEDAVCLKE 444
            ..|||.|.| ||.||||.|.|..|:|.:|||.| ..|.:.|::                 :|:::
  Rat   883 PDSKPPENQRACSTEPCPPEWFIGDWLECSKTC-DGGMRTRAV-----------------LCIRK 929

  Fly   445 VGNKPATKQECNRDVKNCPKYHLGPWTPCDKLCGDGKQTRKVTCFIEENGHKRVLPEEDCVEEKP 509
            ||  |:.::                                            .|...||:..:|
  Rat   930 VG--PSEEE--------------------------------------------TLDYSDCLTHRP 948

  Fly   510 ETEKSCLLTPCEGVDWIISQWSGCNACGQNTETRTAICGNKEGKVYPEEFCEPEVPTLSRPCKSP 574
            ..::|                                                        |.:.
  Rat   949 VEKES--------------------------------------------------------CNNQ 957

  Fly   575 KCEAQWFSSEWSKCSAPCGKGVKSRIVICGEFDGKTVTPADDDSKCNKETKPESEQDCE-GEEKV 638
            .|..||.:.:||:|:..||.|.|.|||:|...|.....||   ::|.:|:||.:...|. |.   
  Rat   958 SCPPQWVALDWSECTPKCGSGFKHRIVLCKSSDLSKTFPA---AQCPEESKPPARIRCSLGR--- 1016

  Fly   639 C-PGEWFTGPWGKCSKPCGGGERVREVLCLS-NGTKSVNCDEEKVEPLSEKCNSEACTEDEILPL 701
            | |..|.||.||:||..||.|:::|.|.||| .|..||:|.|....|..::|:|:.    :..||
  Rat  1017 CPPPRWVTGDWGQCSAQCGLGQQMRTVQCLSYTGQASVDCPEAVRPPSMQQCDSKC----DSTPL 1077

  Fly   702 TSTDKPIEDDEEDCDE 717
            :||        |:|.:
  Rat  1078 SST--------EECKD 1085

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpnNP_788752.2 TSP1 60..111 CDD:214559 24/51 (47%)
ADAMTS_CR_3 116..213 CDD:437068 54/97 (56%)
ADAMTS_spacer1 222..329 CDD:461796 33/106 (31%)
TSP1_ADAMTS 347..396 CDD:465950 21/49 (43%)
TSP1_ADAMTS 400..457 CDD:465950 13/56 (23%)
TSP1_ADAMTS 465..520 CDD:465950 5/54 (9%)
TSP1_ADAMTS 580..632 CDD:465950 19/51 (37%)
TSP1_ADAMTS 643..693 CDD:465950 23/50 (46%)
MSCRAMM_ClfA <1049..1262 CDD:468110
Kunitz_papilin_lacunin-like 1612..1663 CDD:438681
Kunitz_BPTI 1670..1721 CDD:425421
Kunitz-type 1730..1780 CDD:438633
Kunitz_BPTI 1789..1840 CDD:425421
Kunitz_papilin_mig6-like 1849..1899 CDD:438679
Kunitz_papilin_mig6-like 1922..1972 CDD:438679
Kunitz_papilin_mig6-like 2001..2051 CDD:438679
Kunitz-type 2071..2121 CDD:438633
Kunitz_BPTI 2127..2178 CDD:425421
Kunitz_BPTI 2193..2245 CDD:425421
Kunitz_BPTI 2252..2303 CDD:425421
Kunitz_BPTI 2317..2372 CDD:425421
WAP 2455..2497 CDD:459672
Ig 2530..2610 CDD:472250
Ig strand B 2539..2543 CDD:409353
Ig strand C 2552..2556 CDD:409353
Ig strand E 2576..2579 CDD:409353
Ig strand F 2589..2594 CDD:409353
Ig strand G 2603..2606 CDD:409353
IG_like 2627..2703 CDD:214653
Ig strand B 2636..2640 CDD:409353
Ig strand C 2649..2653 CDD:409353
Ig strand E 2670..2674 CDD:409353
Ig strand F 2684..2689 CDD:409353
Ig strand G 2697..2700 CDD:409353
I-set 2766..2845 CDD:400151
Ig strand B 2771..2775 CDD:409353
Ig strand C 2784..2788 CDD:409353
Ig strand F 2821..2826 CDD:409353
PLAC 2851..2883 CDD:462560
Adamts6NP_001102014.2 Pep_M12B_propep 43..191 CDD:460254
ZnMc_ADAMTS_like 250..465 CDD:239801
ADAMTS_CR_2 480..548 CDD:465496
TSP1 561..613 CDD:214559 24/51 (47%)
ADAMTS_CR_3 618..716 CDD:437068 54/97 (56%)
ADAMTS_spacer1 719..829 CDD:461796 34/112 (30%)
TSP1_ADAMTS 844..899 CDD:465950 24/54 (44%)
TSP1_ADAMTS 903..959 CDD:465950 19/175 (11%)
TSP1_ADAMTS 963..1017 CDD:465950 21/59 (36%)
TSP1_ADAMTS 1022..1071 CDD:465950 22/48 (46%)
PLAC 1083..1115 CDD:462560 1/3 (33%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.