DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ppn and Thsd7b

DIOPT Version :9

Sequence 1:NP_788752.2 Gene:Ppn / 43872 FlyBaseID:FBgn0003137 Length:2898 Species:Drosophila melanogaster
Sequence 2:XP_038946352.1 Gene:Thsd7b / 289007 RGDID:1306938 Length:1609 Species:Rattus norvegicus


Alignment Length:900 Identity:188/900 - (20%)
Similarity:284/900 - (31%) Gaps:341/900 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 PDEWTPW--------SSPSDCSRTCGGGVSYQTRE--CLRRDDRGEAVCSGGSRRYFSCNTQDCP 111
            |.:|:|.        ...:..|..||.|:  |||:  |:..|::             |....:|.
  Rat   802 PQKWSPCILVPESIRQGRTGTSEACGKGL--QTRDVSCISDDNQ-------------SAEMTECL 851

  Fly   112 EEESDF--RAQQCSRFDRQQFDGVFYEWVPYTNAPNPCELNCMPKGERFYYRQRE---KVVDGTR 171
            .:.:..  ..|:|:...|:  |..|..|..:|    ||..||    |....|:|:   |.....|
  Rat   852 RQMNGMPPLVQECTIACRE--DCTFTPWSKFT----PCSKNC----EATQIRRRQLTGKSRKKER 906

  Fly   172 CNDKDLDVCVNGECMPVGCDMMLGSDAKEDKCRKCGGDGSTCKTIRNTITTKDLAPGYNDLLLLP 236
            |.|..|...|  |..|..||..:....         |:.|.|                    :||
  Rat   907 CQDASLYPLV--ELEPCPCDAFMSHPY---------GNWSAC--------------------ILP 940

  Fly   237 EG------------------ATNIRIEETVPSSNYLACRNHSGHYYLNGDWRIDFPRPM--FFAN 281
            ||                  ...:|...       :||.:      :||       ||:  .|.|
  Rat   941 EGKRDPQQGGLWVQGDDKECGEGVRFRA-------IACTD------ING-------RPVDPSFCN 985

  Fly   282 SWWNYQRKPMGFAAPDQLTCS-------GPISESLFIVMLVQEK--------------NISLDYE 325
            |....|.   ....|....|.       |..|.|..|.:.::.|              .:.|..:
  Rat   986 SSGYIQE---ACVIPCPFDCKLSDWSSWGSCSSSCGIGVRIRSKWLKEKPYSGGRPCPKLDLKNQ 1047

  Fly   326 YSIPESL-SHSQQDTHTWTHHQFNAC-------SASCGGGSQSRKVTCNNRITLAE-----VNPS 377
            ..:.|:: .:|:.|.::|....::.|       |..||.|:|||::.|   ::.|:     |:.|
  Rat  1048 AQVHEAVPCYSECDQYSWVVEHWSPCKINNELRSPRCGRGTQSRRIRC---VSTADREGGAVDRS 1109

  Fly   378 LCDQKSKPVEEQACG----TEPCAPHWVEGEWSKCSKGCGSDGFQNR----------SITCERIS 428
            ||:|...|.|.|||.    :|.....|  |.||||.:.|.....|.|          |.||...|
  Rat  1110 LCNQDDAPPETQACSLLCPSECVMSEW--GTWSKCPQSCDPHATQRRTRHLLRPSLNSRTCGEDS 1172

  Fly   429 ------------------------------SSGEHTVEEDAVCLKEVGNKPATKQEC---NRD-- 458
                                          |.|:........|::..| ||.:...|   |.|  
  Rat  1173 QVRPCLLNENCFQFQYNLTEWSTCQLSENISCGQGVRTRLLSCVRSDG-KPVSMDHCEERNLDKP 1236

  Fly   459 -----------VKNCPKYHLGPWTPCDKLCGD-GKQTRKVTCFIEENGHKRVLPEEDCVEEKPET 511
                       |.||.......||.|.:.||. |:.:|.....:...|..|..|.| ..::||  
  Rat  1237 QRMSIPCLVECVVNCQLSGWTTWTECSQTCGQGGRMSRTRFIIMPTQGEGRRCPTE-LTQQKP-- 1298

  Fly   512 EKSCLLTPCEGVDWIISQWSGCNA----CGQNTETRTAICGNKEGK-----VYPEEFCEPEVP-- 565
               |.:|||  ..|::..||.|..    ||:..:.|:..|....|.     |..|:....|||  
  Rat  1299 ---CPVTPC--YSWVLGNWSACKLEGGDCGEGVQVRSFSCVVHNGSISHTAVQVEDTLCGEVPFQ 1358

  Fly   566 ------TLSRPCKSPKCEAQWFSSEWSKCSAPC---------GKGVKSRIVICGEFDGKTVTPAD 615
                  ..|.||........|  ||||||...|         |:..:||..|...|:        
  Rat  1359 EGLQKQLCSVPCPGDCHITPW--SEWSKCELTCIDGRSFETTGRQSRSRTFIIQSFE-------- 1413

  Fly   616 DDSKCNKETKPESEQDCEGEEKVCPGEWFTGPWGKCSKPCGGGERVREVLCL---------SNGT 671
                 |:::.|:...:                    ::||.||:      |.         :|..
  Rat  1414 -----NQDSCPQQVLE--------------------TRPCAGGK------CYHYTWKASLWNNNE 1447

  Fly   672 KSVNCDEEKVEPLSEKCNSEA------------------CTEDEILPLTSTDKPIEDDEEDCDED 718
            ::|.|.......::..|:.:|                  ||:..:.              .|::.
  Rat  1448 RTVWCQRSDGLNVTGGCSPQARPAAIRQCIPACKKPFSYCTQGGVC--------------GCEQG 1498

  Fly   719 GIELI-SDGLSD--------DEKSEDVIDLEGTAKTETTPEAEDLMQSDSPTPYD 764
            ..|:: |.|..|        ::|..||....|..: ....:..|:.:..|..|.|
  Rat  1499 YTEIMRSSGFLDYCMKVPGSEDKKADVKTFSGKNR-PVNSKIHDIFKGWSLQPLD 1552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpnNP_788752.2 TSP1 60..111 CDD:214559 12/60 (20%)
ADAM_spacer1 214..329 CDD:283607 23/155 (15%)
TSP1 468..521 CDD:214559 16/53 (30%)
TSP_1 645..693 CDD:278517 10/74 (14%)
Kunitz_BPTI 1611..1663 CDD:278443
Kunitz_BPTI 1670..1721 CDD:278443
Kunitz_BPTI 1729..1781 CDD:278443
Kunitz_BPTI 1789..1840 CDD:278443
Kunitz_BPTI 1848..1899 CDD:278443
KU 1920..1973 CDD:238057
Kunitz_BPTI 2001..2051 CDD:278443
KU 2071..2121 CDD:238057
Kunitz_BPTI 2127..2178 CDD:278443
KU 2192..2245 CDD:238057
KU 2251..2304 CDD:238057
KU 2316..2372 CDD:238057
WAP 2457..2497 CDD:278522
Ig 2521..2610 CDD:299845
IG_like 2530..2610 CDD:214653
IG_like 2627..2703 CDD:214653
Ig 2636..2701 CDD:143165
IG_like 2766..2841 CDD:214653
Ig 2768..2830 CDD:299845
PLAC 2851..2883 CDD:285849
Thsd7bXP_038946352.1 TSP1_ADAMTS 44..95 CDD:408800
TSP1_spondin 180..229 CDD:408798
TSP1_spondin 337..398 CDD:408798
TSP1_spondin 602..660 CDD:408798
TSP1_ADAMTS 665..734 CDD:408800
TSP1_spondin 738..789 CDD:408798
TSP1_ADAMTS 1065..1125 CDD:408800 21/62 (34%)
TSP1_spondin 1131..1177 CDD:408798 13/47 (28%)
TSP1_spondin 1251..1304 CDD:408798 16/58 (28%)
TSP1_spondin 1374..1433 CDD:408798 19/99 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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