DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ppn and Adamts17

DIOPT Version :9

Sequence 1:NP_788752.2 Gene:Ppn / 43872 FlyBaseID:FBgn0003137 Length:2898 Species:Drosophila melanogaster
Sequence 2:NP_001029049.2 Gene:Adamts17 / 233332 MGIID:3588195 Length:1122 Species:Mus musculus


Alignment Length:671 Identity:197/671 - (29%)
Similarity:278/671 - (41%) Gaps:169/671 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 SVTPGGEGNDPDEWTPWSSPSDCSRTCGGGVSYQTRECLRRDD----RGEAVCSGGSRRYFSCNT 107
            |.||..|..|.| |:.||:.|.||||||.|..::.|:|   |:    .|...|.|.|..:.:|..
Mouse   532 SKTPIPEHVDGD-WSLWSAWSMCSRTCGTGARFRQRKC---DNPPPGPGGTHCQGASVEHAACEK 592

  Fly   108 QDCPEEESDFRAQQCSRFDR--QQFDGVFYEWVPYTNAPNPCELNCMPKGERFYYRQREKVVDGT 170
            ..||:....||.|||...||  .:..|:....|.   ...||||.|.|.|:.......::|:|||
Mouse   593 LPCPKGVPSFRDQQCQAHDRLSSKKRGLLTAVVV---DDKPCELYCSPLGKESPLLVADRVLDGT 654

  Fly   171 RCNDKDLDVCVNGECMPVGCDMMLGSDAKEDKCRKCGGDGSTCKTIRNTITTKDLAPGYNDLLLL 235
            .|...:.|:||.|.|..:|||.::||.||||:|..|.|||.||:.::... :.....||.:.:::
Mouse   655 PCGPYEADLCVYGRCQKIGCDGIIGSAAKEDRCGVCSGDGKTCRVVKGDF-SHSRGTGYIEAVVI 718

  Fly   236 PEGATNIRIEETVPSSNYLACRNHSGHYYLNGDWRIDFPRPMFFANSWWNYQRKPMGFAAPDQLT 300
            |.||..||:.|..|:.::||.:: |....:|.||:|:.|.....|.:...|.|:.:.    ::.:
Mouse   719 PVGARRIRVVEDKPAHSFLALKD-SSKRSINSDWKIELPGEFQIAGTTVRYVRRGLW----EKFS 778

  Fly   301 CSGPISESL-FIVMLVQEKNISLDYEYSIPESLSHSQQD--------THTWTHHQFNACSASCGG 356
            ..||.:..| .:|:|..::|..:.|||:||.:.|...|.        ...|||..:..||..|||
Mouse   779 AKGPTTVPLHLMVLLFHDQNYGIHYEYTIPVNQSSENQSEPAKPQDALFLWTHSGWEGCSVQCGG 843

  Fly   357 GSQSRKVTC----NNRITLAEVNPSLCDQKSKPVEE-QACGTEPCAPHWVEGEWSKCSKGCGSDG 416
            |.:...|:|    |...||  ||.|.|.|.|:|..: :.|.:.||...||.|:||.||..| ..|
Mouse   844 GERRTIVSCTRIVNKTTTL--VNDSDCPQASRPEPQVRRCNSHPCQSRWVTGQWSPCSATC-EKG 905

  Fly   417 FQNRSITCERISSSGEHTVEEDAVCLKEVGNKPATKQECNRDVKNCPKYHLGPWTPCDKLCGDGK 481
            .|:|.:||.....:|.|                         |...|.|                
Mouse   906 VQHREVTCVYQLQNGTH-------------------------VTTRPIY---------------- 929

  Fly   482 QTRKVTCFIEENGHKRVLPEEDCVEEKPETEKSCLLTPCEGVDWIISQWSGCNACGQNTETRTAI 546
                                  |.|.:|...:|     |||.|                      
Mouse   930 ----------------------CSEPRPTPVQS-----CEGQD---------------------- 945

  Fly   547 CGNKEGKVYPEEFCEPEVPTLSRPCKSPKCEAQWFSSEWSKCSAPCGKGVKSRIVICGEFDGKTV 611
                                         |.:.|.:||||:|||.||||::.|.|.|....|   
Mouse   946 -----------------------------CLSIWEASEWSECSANCGKGIQKRTVTCTNSQG--- 978

  Fly   612 TPADDDSKCNKETKPESEQDCEGEEKVCPGEWFTGPWGKCSKPCGGGERVREVLCLS--NGTKSV 674
                   ||:..|:|::|::|| :...| .||.||.|.|||..||.|.:.|.|.|:.  .|....
Mouse   979 -------KCDASTRPKAEEECE-DYSGC-YEWKTGDWSKCSSTCGKGLQSRVVQCMHKLTGRHGS 1034

  Fly   675 NCDEEKVEPLSEKCNSEACTE 695
            .|..........:|:.|.|.|
Mouse  1035 ECPTLSKPAAYRQCHQEVCNE 1055

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpnNP_788752.2 TSP1 60..111 CDD:214559 19/54 (35%)
ADAM_spacer1 214..329 CDD:283607 29/115 (25%)
TSP1 468..521 CDD:214559 4/52 (8%)
TSP_1 645..693 CDD:278517 16/49 (33%)
Kunitz_BPTI 1611..1663 CDD:278443
Kunitz_BPTI 1670..1721 CDD:278443
Kunitz_BPTI 1729..1781 CDD:278443
Kunitz_BPTI 1789..1840 CDD:278443
Kunitz_BPTI 1848..1899 CDD:278443
KU 1920..1973 CDD:238057
Kunitz_BPTI 2001..2051 CDD:278443
KU 2071..2121 CDD:238057
Kunitz_BPTI 2127..2178 CDD:278443
KU 2192..2245 CDD:238057
KU 2251..2304 CDD:238057
KU 2316..2372 CDD:238057
WAP 2457..2497 CDD:278522
Ig 2521..2610 CDD:299845
IG_like 2530..2610 CDD:214653
IG_like 2627..2703 CDD:214653
Ig 2636..2701 CDD:143165
IG_like 2766..2841 CDD:214653
Ig 2768..2830 CDD:299845
PLAC 2851..2883 CDD:285849
Adamts17NP_001029049.2 Pep_M12B_propep 75..179 CDD:279848
Reprolysin 230..447 CDD:279729
ZnMc_ADAMTS_like 230..447 CDD:239801
TSP1 544..596 CDD:214559 19/54 (35%)
ADAM_spacer1 698..808 CDD:283607 29/115 (25%)
TSP_1 892..946 CDD:278517 24/173 (14%)
TSP1 950..994 CDD:214559 23/54 (43%)
TSP1 1001..1053 CDD:214559 17/51 (33%)
PLAC 1080..1106 CDD:285849
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3538
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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