DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ppn and madd-4

DIOPT Version :10

Sequence 1:NP_788752.2 Gene:Ppn / 43872 FlyBaseID:FBgn0003137 Length:2898 Species:Drosophila melanogaster
Sequence 2:NP_492405.3 Gene:madd-4 / 172706 WormBaseID:WBGene00009958 Length:1045 Species:Caenorhabditis elegans


Alignment Length:756 Identity:184/756 - (24%)
Similarity:270/756 - (35%) Gaps:202/756 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 WTPWSSPSDCSRTCGGGVSYQTRECLRRDDRGEAVCSGGSRRYFSCNTQDCPEEESDFRAQQCSR 124
            |:||||   |::|||||||.|.|.||      .:.|||.|.|:..|..:.|..:         ||
 Worm    29 WSPWSS---CTKTCGGGVSRQLRRCL------TSKCSGESVRFKVCAQKTCESK---------SR 75

  Fly   125 FDRQQFDGVFYEWVPYTNAPNPCELNCMPK--GERFYYRQREKVVDGTRCN-DKDLDVCVNGECM 186
            ..|....| ..|.|    :...||:.|..:  |..|.:|    |.|||.|. .....||..|.|.
 Worm    76 LARDTICG-GEEIV----SRGQCEVVCRSRLTGANFLWR----VDDGTPCQAATSRAVCSKGSCQ 131

  Fly   187 PVGCDMMLGSDAKEDKCRKCGGDGSTCKTIRNTITTKDLAPGYNDLLLLPEGATNIRIEETVPSS 251
            .||||.::.|..:.|.|..|||.|.||                      ..|....::.|     
 Worm   132 IVGCDGLISSSFRFDACGVCGGRGDTC----------------------DNGKFIWKVSE----- 169

  Fly   252 NYLACRNHSGHYYLNGDWRIDFPRPMFFANSWWNYQRKPMGFAAPDQLTCSGPISESLFIVMLVQ 316
            .|.||.:       |.|..:|           |:...:.:...:...:.|...|:..:       
 Worm   170 EYTACAS-------NCDDIVD-----------WSGAGRSIASTSQPIVVCVNAITGRV------- 209

  Fly   317 EKNISLDYEYSIPESLSHSQ---------------QDTHTWTHHQFNACSASCGGGSQSRKVTC- 365
                       :||.|...:               .....|....:..|...||.|::.|:|.| 
 Worm   210 -----------VPEKLCADKLRPKVEARPCPMLICPSRCRWMAADWTECVPHCGEGTRKREVYCV 263

  Fly   366 --NNRITLAEVNPSLCDQKSKPVEEQACGTEPCAPHWVEGEWSKCSKGCGSDGFQNRSITCERIS 428
              .:.:|: .|..:.|:..::|..|:.|.:..|. .|..|:||||:..|| .|.:.|.:.|...|
 Worm   264 QTAHNVTV-HVPDTFCENGTRPAAEENCVSTSCG-RWEAGKWSKCTASCG-QGVRRRHVACVGGS 325

  Fly   429 SSGEHTVEEDAVCLKEVGNKPATKQEC------------------------------NRDVKNCP 463
            ...|             |.:|..:..|                              |.:....|
 Worm   326 DCDE-------------GGRPRQETTCYAGIPCSIATNSLDWNDRAYLDGNTFGSMDNHNDWQAP 377

  Fly   464 KYHLGPWTPCDKLCGDGKQTRKVTCF----IEENGHKRVLPEEDCV-EEKPETEKSCLLTPC--- 520
            :...|.|:.|...||.|..:|.|.|.    |.....|  ||..:|. :|:|:..:||.:..|   
 Worm   378 RLVAGEWSTCSSTCGTGVMSRTVECVAVNPISSAPIK--LPMSECQDQEQPKLFESCEVRSCPLQ 440

  Fly   521 ---------EGVDWIISQWSGCNACGQNTETRTAI-CGN-KEGKVYPEEFCEP--EVPTLSRPCK 572
                     ....|....|:.|:|.....:.:.|: |.. ..||......|:.  ..|..||||.
 Worm   441 EDSKLSEDEAPYQWRYGDWTQCSASCLGGKQKAALKCIQVSTGKSVQWSQCDARRRPPEKSRPCN 505

  Fly   573 SPKCEAQWFSSEWSKCSAPCGKGVKSRIVICGEFDGKTVTPADD--------DSKCNKETKPESE 629
            ...|...|.:|::|.||..||.|...|.|.|.:    ||:..|.        |.:|:.: ||:..
 Worm   506 QHPCPPFWLTSKYSDCSMSCGSGTARRSVKCAQ----TVSKTDGADAHIVLRDDRCHFK-KPQET 565

  Fly   630 QDCEGEEKVCPGEWFTGPWGKCSKPCGGGERVREVLCLSNGTK-------SVNCDEEKVEPLSEK 687
            :.|  ....||..|.|..|.:||:.|..|||.|:|.|....::       .|.||........|.
 Worm   566 ETC--NVVACPATWVTAQWTECSRSCDSGERRRQVWCEIRDSRGKTQRRPDVECDANTKPQTVEV 628

  Fly   688 CNSEACTEDEILPLTSTDKPIEDDEEDCDEDGIELISDGLS 728
            |:..:|:..|:|.....::..|..:......|:..:..|.|
 Worm   629 CSFGSCSRPELLSNRVFEQNAEQKKLTLGIGGVATLYQGTS 669

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpnNP_788752.2 TSP1 60..111 CDD:214559 23/50 (46%)
ADAMTS_CR_3 116..213 CDD:437068 32/99 (32%)
ADAMTS_spacer1 222..329 CDD:461796 11/106 (10%)
TSP1_ADAMTS 347..396 CDD:465950 13/51 (25%)
TSP1_ADAMTS 400..457 CDD:465950 16/86 (19%)
TSP1_ADAMTS 465..520 CDD:465950 18/59 (31%)
TSP1_ADAMTS 580..632 CDD:465950 18/59 (31%)
TSP1_ADAMTS 643..693 CDD:465950 17/56 (30%)
MSCRAMM_ClfA <1049..1262 CDD:468110
Kunitz_papilin_lacunin-like 1612..1663 CDD:438681
Kunitz_BPTI 1670..1721 CDD:425421
Kunitz-type 1730..1780 CDD:438633
Kunitz_BPTI 1789..1840 CDD:425421
Kunitz_papilin_mig6-like 1849..1899 CDD:438679
Kunitz_papilin_mig6-like 1922..1972 CDD:438679
Kunitz_papilin_mig6-like 2001..2051 CDD:438679
Kunitz-type 2071..2121 CDD:438633
Kunitz_BPTI 2127..2178 CDD:425421
Kunitz_BPTI 2193..2245 CDD:425421
Kunitz_BPTI 2252..2303 CDD:425421
Kunitz_BPTI 2317..2372 CDD:425421
WAP 2455..2497 CDD:459672
Ig 2530..2610 CDD:472250
Ig strand B 2539..2543 CDD:409353
Ig strand C 2552..2556 CDD:409353
Ig strand E 2576..2579 CDD:409353
Ig strand F 2589..2594 CDD:409353
Ig strand G 2603..2606 CDD:409353
IG_like 2627..2703 CDD:214653
Ig strand B 2636..2640 CDD:409353
Ig strand C 2649..2653 CDD:409353
Ig strand E 2670..2674 CDD:409353
Ig strand F 2684..2689 CDD:409353
Ig strand G 2697..2700 CDD:409353
I-set 2766..2845 CDD:400151
Ig strand B 2771..2775 CDD:409353
Ig strand C 2784..2788 CDD:409353
Ig strand F 2821..2826 CDD:409353
PLAC 2851..2883 CDD:462560
madd-4NP_492405.3 TSP1 26..71 CDD:214559 23/50 (46%)
ADAMTS_CR_3 <88..158 CDD:437068 27/77 (35%)
TSP1_ADAMTS 239..295 CDD:465950 14/56 (25%)
TSP1_ADAMTS 298..339 CDD:465950 15/54 (28%)
TSP1_ADAMTS 380..437 CDD:465950 18/58 (31%)
TSP1_ADAMTS 454..509 CDD:465950 14/54 (26%)
TSP1_ADAMTS 513..573 CDD:465950 19/66 (29%)
TSP1_ADAMTS 577..634 CDD:465950 17/56 (30%)
Ig 645..730 CDD:472250 4/25 (16%)
Ig strand B 670..674 CDD:409353 184/756 (24%)
Ig strand C 683..687 CDD:409353
Ig strand E 705..709 CDD:409353
Ig strand F 719..724 CDD:409353
TSP1_ADAMTS 812..872 CDD:465950
TSP1_ADAMTS 936..994 CDD:465950
Blue background indicates that the domain is not in the aligned region.

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