DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ppn and Adamts13

DIOPT Version :10

Sequence 1:NP_788752.2 Gene:Ppn / 43872 FlyBaseID:FBgn0003137 Length:2898 Species:Drosophila melanogaster
Sequence 2:XP_006233941.3 Gene:Adamts13 / 102554393 RGDID:1311594 Length:1482 Species:Rattus norvegicus


Alignment Length:734 Identity:186/734 - (25%)
Similarity:281/734 - (38%) Gaps:148/734 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 WTPWSSPSDCSRTCGGGVSYQTRECLR-RDDRGEAVCSGGSRRYFSCNTQDCPEEESDFRAQQCS 123
            |:.|...|.|||:|||||..:.|.|.. |...|...|.|...:...||||.|.:.:.:|.::||:
  Rat   449 WSSWGPHSPCSRSCGGGVITRRRWCNNPRPAFGGRACVGEDLQAKMCNTQACEKTQLEFMSEQCA 513

  Fly   124 RFDR-----QQFDGVFYEW---VPYTNAPNPCELNCMPKGERFYYRQREKVVDGTRC------ND 174
            :.||     .|....||.|   |.|:.....|...|...||.|...:.:..:|||||      .|
  Rat   514 QTDRHPLQLSQGSASFYHWDAAVQYSQGDTLCRHMCWAVGESFIVSRGDSFLDGTRCVPNGPRED 578

  Fly   175 KDLDVCVNGECMPVGCDMMLGSDAKEDKCRKCGGDGSTCKTIRNTITTKDLAPGYNDLLLLPEGA 239
            ..:.:|:.|.|...|||..:.|....|.|:.||||.||| |.:|...|...|..|...|::....
  Rat   579 GTVSLCLLGSCRTFGCDGKMDSQQVWDACQVCGGDNSTC-TSQNGSFTAGRAREYVTFLIVTPNM 642

  Fly   240 TNIRIEETVPSSNYLACRNHSGHYYLNG---------------DWRIDF---------PRPMFFA 280
            |:..:....|...:||.|... ||.::|               |:|:::         ||     
  Rat   643 TSAHVINHRPLFTHLAVRIQD-HYIVSGKSSMSPNVTYPSLLEDYRVEYRVTLTEDQLPR----- 701

  Fly   281 NSWWNYQRKPMGFAAPDQLTCSGPISESLFIVML---------VQEKNISLDYEYSIPESLSHSQ 336
                           .:::...||:.:.:.|.:.         :...:|:..|       ....|
  Rat   702 ---------------LEEIHIRGPVRDDIEIQVYRRYGGEYGGLTHPDITFTY-------FQRKQ 744

  Fly   337 QDTHTWTHHQFNACSASCGGGSQSRKVTCNNRITLAEVNPSLCD-QKSKPVEEQACGTEPCAPHW 400
            |....|...: ..||.|||.|.:....:|.::.....|..:.|. ....|..::.|.:.||.|||
  Rat   745 QAAWVWAAKR-GPCSVSCGAGLRWVTYSCQDQAQNKWVRNAQCQGSPQPPAWQEPCVSAPCPPHW 808

  Fly   401 VEGEWSKCSKGCGSDGFQNRSITCERISSSGEHTVEEDAVCLKEVGNKPATKQE-CNRDVKNCPK 464
            |..::..||..||. |.:.||:.|....:....|: ..|.| :.|..:||.:.| ||.  :.||.
  Rat   809 VADDFGPCSVSCGG-GLRERSLRCVEAHNGFLKTL-PPAPC-RAVAQQPAGEVENCNS--QPCPT 868

  Fly   465 -YHLGPWTPC-DKLCGDGKQTRKVTCFIEENGHKR------VLPE------EDCV---------- 505
             :.:...:|| ...|..|.::...||.......::      ..|:      |.||          
  Rat   869 GWEVSDPSPCVSSACEPGLESGSGTCVPRVGDSEKPAMAGPCRPDDMSPVPEPCVRTTCSPGSGP 933

  Fly   506 -------EE--------KPETEKSCLLTPCEGVDWIISQWSGCN-ACGQNTETRTAICGNKEGKV 554
                   ||        ||.::...:.||..|:         |: :||:..:....:|.:...|:
  Rat   934 VDTMSLGEEASSPVGSGKPSSQAEHVWTPLVGL---------CSISCGKGLKELYFLCMDSVLKM 989

  Fly   555 -YPEEFC--EPEVPTLSRPCKSPKCEAQWFSSEWSKCSAPCGKGVKSRIVICGEFD-GKTVTPAD 615
             ..||.|  ..:.|:....|::..|.|:|.:...:.|...||.|.....:.|.:.| |:.|:.  
  Rat   990 PVQEELCGLASKPPSRWEVCRARPCPARWETRVLAPCPVTCGGGRVPLAIHCVQLDHGRPVSV-- 1052

  Fly   616 DDSKCNKETKPESEQDCEGEEKVCPGEWFTGPWGKCSKPCGGGERVREVLCL------SNGTKSV 674
            ..|||....:|.|.:||..|.  ||..|...|.|.||..||.|...:.|.|:      .|.....
  Rat  1053 PHSKCWPAPRPGSFEDCSPEP--CPARWKVLPLGPCSASCGLGTATQMVACVQLDQGHDNEVDET 1115

  Fly   675 NCDEEKVEPLSEKCNSEAC 693
            .|......|.|..|....|
  Rat  1116 FCKALVRPPASVPCLIADC 1134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpnNP_788752.2 TSP1 60..111 CDD:214559 21/51 (41%)
ADAMTS_CR_3 116..213 CDD:437068 36/110 (33%)
ADAMTS_spacer1 222..329 CDD:461796 21/139 (15%)
TSP1_ADAMTS 347..396 CDD:465950 11/49 (22%)
TSP1_ADAMTS 400..457 CDD:465950 18/57 (32%)
TSP1_ADAMTS 465..520 CDD:465950 15/92 (16%)
TSP1_ADAMTS 580..632 CDD:465950 14/52 (27%)
TSP1_ADAMTS 643..693 CDD:465950 15/55 (27%)
MSCRAMM_ClfA <1049..1262 CDD:468110
Kunitz_papilin_lacunin-like 1612..1663 CDD:438681
Kunitz_BPTI 1670..1721 CDD:425421
Kunitz-type 1730..1780 CDD:438633
Kunitz_BPTI 1789..1840 CDD:425421
Kunitz_papilin_mig6-like 1849..1899 CDD:438679
Kunitz_papilin_mig6-like 1922..1972 CDD:438679
Kunitz_papilin_mig6-like 2001..2051 CDD:438679
Kunitz-type 2071..2121 CDD:438633
Kunitz_BPTI 2127..2178 CDD:425421
Kunitz_BPTI 2193..2245 CDD:425421
Kunitz_BPTI 2252..2303 CDD:425421
Kunitz_BPTI 2317..2372 CDD:425421
WAP 2455..2497 CDD:459672
Ig 2530..2610 CDD:472250
Ig strand B 2539..2543 CDD:409353
Ig strand C 2552..2556 CDD:409353
Ig strand E 2576..2579 CDD:409353
Ig strand F 2589..2594 CDD:409353
Ig strand G 2603..2606 CDD:409353
IG_like 2627..2703 CDD:214653
Ig strand B 2636..2640 CDD:409353
Ig strand C 2649..2653 CDD:409353
Ig strand E 2670..2674 CDD:409353
Ig strand F 2684..2689 CDD:409353
Ig strand G 2697..2700 CDD:409353
I-set 2766..2845 CDD:400151
Ig strand B 2771..2775 CDD:409353
Ig strand C 2784..2788 CDD:409353
Ig strand F 2821..2826 CDD:409353
PLAC 2851..2883 CDD:462560
Adamts13XP_006233941.3 ZnMc_ADAMTS_like 139..345 CDD:239801
ADAMTS_CR_2 363..433 CDD:465496
TSP1 449..501 CDD:214559 21/51 (41%)
ADAMTS_CR_3 503..617 CDD:437068 36/113 (32%)
ADAMTS_spacer1 620..741 CDD:461796 22/148 (15%)
TSP1_ADAMTS 755..804 CDD:465950 11/48 (23%)
TSP1_ADAMTS 808..866 CDD:465950 19/62 (31%)
TSP1_ADAMTS 960..1014 CDD:465950 13/62 (21%)
TSP1_ADAMTS 1018..1074 CDD:465950 17/59 (29%)
TSP1_ADAMTS 1078..1134 CDD:465950 15/55 (27%)
TSP1_ADAMTS 1138..1192 CDD:465950
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.