DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ppn and thsd4

DIOPT Version :10

Sequence 1:NP_788752.2 Gene:Ppn / 43872 FlyBaseID:FBgn0003137 Length:2898 Species:Drosophila melanogaster
Sequence 2:XP_017947904.2 Gene:thsd4 / 100493458 XenbaseID:XB-GENE-6035027 Length:988 Species:Xenopus tropicalis


Alignment Length:701 Identity:230/701 - (32%)
Similarity:327/701 - (46%) Gaps:105/701 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 CSGGSRRYFSCNTQDCPEEESDFRAQQCSRFDRQQFDGVFYEWVPYTNAPN--PCELNCMPKGER 157
            |.|..::|..||...||......|..||:.::.:.|.|..|||.|:|....  .|||.|...|.|
 Frog   279 CIGPYKQYKLCNKNLCPGSNRGIREVQCASYNNKPFMGRLYEWEPFTEEKGALKCELTCRAVGYR 343

  Fly   158 FYYRQREKVVDGTRCNDKDLDVCVNGECMPVGCDMMLGSDAKEDKCRKCGGDGSTCKTIRNTITT 222
            ||.||.|||:||..|:|....|||:|:|..:|||..||||...|||..||||.:.||.:......
 Frog   344 FYVRQAEKVIDGAPCDDNGTAVCVSGQCKNIGCDDYLGSDKVLDKCGVCGGDNTACKVVSGVFKH 408

  Fly   223 KDLAPGYNDLLLLPEGATNIRIEETVPSSNYLACRNHSGHYYLNGDWRIDFPRPMFFANSWWNYQ 287
            ..:..||:.::.:|||||.|.:.|...|:||||.|:.||...:||:|.||.|.......:.:.|:
 Frog   409 VLIKVGYHKVVEIPEGATKINVTEMTKSNNYLALRSRSGRSIINGNWAIDRPGRYEGGGTMFTYK 473

  Fly   288 R-KPMGFAAPDQLTCSGPISESLFIVMLVQEKNISLDYEYSIP---------------------- 329
            | ..:...|.:.....||.:|.|.:.|:.|:.|..:.|||.||                      
 Frog   474 RPNEISSTAGESFLAEGPTNEVLDVYMIHQQPNPGIHYEYVIPAENAISPQLPPHRRPVEPFNGQ 538

  Fly   330 ---------ESLSHSQQDTHT--------WTHHQ----------------FN-------ACSASC 354
                     ...|.|:.||.:        :..||                ||       .||.:|
 Frog   539 LEETSDPTENGDSFSEIDTESFPGRHPGRYPSHQPDNQVLPLQPPRRSRDFNWKQVGSTECSTTC 603

  Fly   355 GGGSQSRKVTCNNRITLAEVNPSLCDQKSKP-VEEQACGTEPCAPHWVEGEWSKCSKGCGSDGFQ 418
            |.||:.....|.||.|..|.....||..:|| .||:.|...||...|..||||:|||.||. |.|
 Frog   604 GKGSRYPVFRCVNRNTHEETADGFCDASAKPSAEEEPCNLFPCPAFWDIGEWSECSKTCGL-GMQ 667

  Fly   419 NRSITCERISSSGEHTVEEDAVCLKEVGNKPATKQECNRDVKNCPKYHL-GPWTPCDKLCGDGKQ 482
            :|.|.|....::...||:.......|   ||.|...|  .:|.|.::.: ..||||...||.|::
 Frog   668 HRQILCRHSYANRTLTVQPHRCQSLE---KPETTSTC--QLKICSEWQIRTDWTPCSVPCGVGQK 727

  Fly   483 TRKVTCFIEENGHKRVLPEEDC-VEEKPETEKSCLLTPCEGVDWIISQWSG-CNA-CGQNTETRT 544
            ||.|.| |...|.  ::.:|:| ::.:|:..::|.:.|| ...|.:::||. |:| ||:...||:
 Frog   728 TRDVKC-ISNIGD--IVDDEECNMKLRPDDIENCDMGPC-AKSWFLTEWSDRCSAECGEGVRTRS 788

  Fly   545 AICGNKEGKVYPEEFCEPEVPTLSRPCKSPKCE--AQWFSSEWSKCSAPCGKGVKSRIVICGEFD 607
            .:|.:......|.|.|....|..:..|.:..||  .:||...||:||..||.|.:.|.|||.:  
 Frog   789 VVCMSNHISSLPLEGCGNHRPPETTTCNNGPCEGKVEWFMGSWSQCSVECGTGTQQRDVICIK-- 851

  Fly   608 GKT------VTPADDDSKCNKETKPESEQDCEGEEKVCPGEWFTGPWGKCSKPCGGGERVREVLC 666
             ||      |.|    ::|:...:|.::|.|  ..|.|..:||...|..|||.|.||.|:|||.|
 Frog   852 -KTAEGFNVVNP----NECSYLERPPNQQSC--HLKSCGAKWFYTDWSTCSKSCEGGFRIREVRC 909

  Fly   667 LSNG-TKSVNCDEEKVEPLSEKCNSEACTEDEILPLTSTDKPIEDDEEDCD 716
            |::. :.|..||:|.....:|.||::.|       :...|:..:|...:|:
 Frog   910 LADDMSHSDKCDQELKPEDTESCNTQDC-------MPEIDENCKDKYYNCN 953

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpnNP_788752.2 TSP1 60..111 CDD:214559 5/15 (33%)
ADAMTS_CR_3 116..213 CDD:437068 46/98 (47%)
ADAMTS_spacer1 222..329 CDD:461796 36/107 (34%)
TSP1_ADAMTS 347..396 CDD:465950 20/56 (36%)
TSP1_ADAMTS 400..457 CDD:465950 22/56 (39%)
TSP1_ADAMTS 465..520 CDD:465950 17/56 (30%)
TSP1_ADAMTS 580..632 CDD:465950 20/57 (35%)
TSP1_ADAMTS 643..693 CDD:465950 22/50 (44%)
MSCRAMM_ClfA <1049..1262 CDD:468110
Kunitz_papilin_lacunin-like 1612..1663 CDD:438681
Kunitz_BPTI 1670..1721 CDD:425421
Kunitz-type 1730..1780 CDD:438633
Kunitz_BPTI 1789..1840 CDD:425421
Kunitz_papilin_mig6-like 1849..1899 CDD:438679
Kunitz_papilin_mig6-like 1922..1972 CDD:438679
Kunitz_papilin_mig6-like 2001..2051 CDD:438679
Kunitz-type 2071..2121 CDD:438633
Kunitz_BPTI 2127..2178 CDD:425421
Kunitz_BPTI 2193..2245 CDD:425421
Kunitz_BPTI 2252..2303 CDD:425421
Kunitz_BPTI 2317..2372 CDD:425421
WAP 2455..2497 CDD:459672
Ig 2530..2610 CDD:472250
Ig strand B 2539..2543 CDD:409353
Ig strand C 2552..2556 CDD:409353
Ig strand E 2576..2579 CDD:409353
Ig strand F 2589..2594 CDD:409353
Ig strand G 2603..2606 CDD:409353
IG_like 2627..2703 CDD:214653
Ig strand B 2636..2640 CDD:409353
Ig strand C 2649..2653 CDD:409353
Ig strand E 2670..2674 CDD:409353
Ig strand F 2684..2689 CDD:409353
Ig strand G 2697..2700 CDD:409353
I-set 2766..2845 CDD:400151
Ig strand B 2771..2775 CDD:409353
Ig strand C 2784..2788 CDD:409353
Ig strand F 2821..2826 CDD:409353
PLAC 2851..2883 CDD:462560
thsd4XP_017947904.2 TSP1 56..>80 CDD:214559
ADAMTS_CR_3 305..399 CDD:437068 45/93 (48%)
ADAMTS_spacer1 401..516 CDD:461796 36/114 (32%)
TSP1_ADAMTS 597..646 CDD:465950 18/48 (38%)
TSP1_ADAMTS 650..706 CDD:465950 23/61 (38%)
TSP1_ADAMTS 709..763 CDD:465950 17/56 (30%)
TSP1_ADAMTS 767..820 CDD:465950 15/52 (29%)
TSP1_ADAMTS 826..882 CDD:465950 22/64 (34%)
TSP1_ADAMTS 886..937 CDD:465950 22/50 (44%)
PLAC 945..974 CDD:462560 2/9 (22%)
Blue background indicates that the domain is not in the aligned region.

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