DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ppn and adamts6

DIOPT Version :10

Sequence 1:NP_788752.2 Gene:Ppn / 43872 FlyBaseID:FBgn0003137 Length:2898 Species:Drosophila melanogaster
Sequence 2:XP_002934253.2 Gene:adamts6 / 100490362 XenbaseID:XB-GENE-951750 Length:1118 Species:Xenopus tropicalis


Alignment Length:749 Identity:236/749 - (31%)
Similarity:330/749 - (44%) Gaps:204/749 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 DSQSRFPGLRQKRQYGAN-------------MYLPESS--VT---PGGEGN-------------- 55
            |.|.||       ||||.             ..|.:|:  ||   |..||.              
 Frog   488 DEQCRF-------QYGATSRQCKYGEVCRELWCLSKSNRCVTNSIPAAEGTLCQTGSIEKGWCYQ 545

  Fly    56 -------------DPDEWTPWSSPSDCSRTCGGGVSYQTREC-LRRDDRGEAVCSGGSRRYFSCN 106
                         |.| |.|||...:|:||||||||...|.| ......|...|.|..:||.|||
 Frog   546 GDCVPFGTWPKSIDGD-WGPWSVWGECTRTCGGGVSSSIRHCDSPAPSGGGKYCLGERKRYRSCN 609

  Fly   107 TQDCPEEESDFRAQQCSRFDRQQFDGVFYEWVPYT-NAPNPCELNCMPKGERFYYRQREKVVDGT 170
            |..||....|||.:||:.||...|.|.:|.|.||| .....|.|||:.:|..||..:...|:|||
 Frog   610 TDPCPSGSRDFREKQCADFDNMPFRGKYYNWKPYTGGGVKACALNCLAEGYNFYTERAPAVIDGT 674

  Fly   171 RCNDKDLDVCVNGECMPVGCDMMLGSDAKEDKCRKCGGDGSTCKTIRNTITTKDLAPGYNDLLLL 235
            |||...||:|:||||..||||.:||||||||:||.||||||||:.|...........||.:::.:
 Frog   675 RCNADSLDICINGECKHVGCDNILGSDAKEDRCRVCGGDGSTCEAIEGFFNDSLPRGGYMEVVQI 739

  Fly   236 PEGATNIRIEETVPSSNYLACRNHSGHYYLNGDWRIDFPRPMFFANSWWNYQRKPMGFAAPDQLT 300
            |.|:.:|.|:|...|.||:|.::....|::||.|.||:||....|.:.::|:|..   ..|:.|.
 Frog   740 PRGSVHIEIKEVSVSKNYIALKSEGDDYFINGAWTIDWPRKFDVAGTAFHYKRPT---DEPESLE 801

  Fly   301 CSGPISESLFIVMLVQEKNISLDYEYSIPESLSHSQQDT--HTWTHHQFNACSASCGGGSQSRKV 363
            ..||.:|||.:::|:||:|:.:.|::::|.:.:.|..:.  .:|.|..::.|||:|.||.|.::|
 Frog   802 ALGPTTESLIVMILLQEQNMGIRYKFNVPITRTGSGDNEVGFSWHHLPWSECSATCAGGIQKQEV 866

  Fly   364 TCNNRITLAEVNPSLCDQKSKPVEEQ-ACGTEPCAPHWVEGEWSKCSKGCGSDGFQNRSITC-ER 426
            .|......:.|..:.||..|||.|.| ||.||.|.|.|..|:||:|||.| ..|.::|::.| .|
 Frog   867 VCKRLDDNSVVQNNYCDLDSKPPETQRACNTELCPPEWFIGDWSECSKTC-DGGMRSRTVLCIRR 930

  Fly   427 ISSSGEHTVEEDAVCLKEVGNKPATKQECNRDVKNCPKYHLGPWTPCDKLCGDGKQTRKVTCFIE 491
            |..|.|.|: :|..||.   ::|..|:.||.  ::||                            
 Frog   931 IGPSEEETL-DDISCLT---HRPIEKEACNN--QSCP---------------------------- 961

  Fly   492 ENGHKRVLPEEDCVEEKPETEKSCLLTPCEGVDWIISQWSGCNACGQNTETRTAICGNKEGKVYP 556
                                                                             
 Frog   962 ----------------------------------------------------------------- 961

  Fly   557 EEFCEPEVPTLSRPCKSPKCEAQWFSSEWSKCSAPCGKGVKSRIVICGEFDGKTVTPADDDSKCN 621
                                 .||.:.:||:|:..||.|.|.|||:|...|.....|   ::.|.
 Frog   962 ---------------------PQWVALDWSECTPKCGPGFKHRIVLCKSSDLSKTFP---NANCP 1002

  Fly   622 KETKPESEQDCE-GEEKVC-PGEWFTGPWGKCSKPCGGGERVREVLCLS-NGTKSVNCDEEKVEP 683
            :|:||.....|. |.   | |..|.||.||:||..||.|:::|.|.||| .|..|.:|.|....|
 Frog  1003 EESKPPVRIRCSLGR---CPPPRWVTGEWGQCSAHCGLGQQMRTVQCLSYTGQASTDCPENLRPP 1064

  Fly   684 LSEKCNSEACTEDEILPLTSTDKPIEDDEEDCDE 717
            ..::|.|:.    :..|:::|        |:|.:
 Frog  1065 SMQQCESKC----DSTPISNT--------EECKD 1086

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpnNP_788752.2 TSP1 60..111 CDD:214559 24/51 (47%)
ADAMTS_CR_3 116..213 CDD:437068 55/97 (57%)
ADAMTS_spacer1 222..329 CDD:461796 34/106 (32%)
TSP1_ADAMTS 347..396 CDD:465950 21/49 (43%)
TSP1_ADAMTS 400..457 CDD:465950 22/57 (39%)
TSP1_ADAMTS 465..520 CDD:465950 0/54 (0%)
TSP1_ADAMTS 580..632 CDD:465950 18/51 (35%)
TSP1_ADAMTS 643..693 CDD:465950 22/50 (44%)
MSCRAMM_ClfA <1049..1262 CDD:468110
Kunitz_papilin_lacunin-like 1612..1663 CDD:438681
Kunitz_BPTI 1670..1721 CDD:425421
Kunitz-type 1730..1780 CDD:438633
Kunitz_BPTI 1789..1840 CDD:425421
Kunitz_papilin_mig6-like 1849..1899 CDD:438679
Kunitz_papilin_mig6-like 1922..1972 CDD:438679
Kunitz_papilin_mig6-like 2001..2051 CDD:438679
Kunitz-type 2071..2121 CDD:438633
Kunitz_BPTI 2127..2178 CDD:425421
Kunitz_BPTI 2193..2245 CDD:425421
Kunitz_BPTI 2252..2303 CDD:425421
Kunitz_BPTI 2317..2372 CDD:425421
WAP 2455..2497 CDD:459672
Ig 2530..2610 CDD:472250
Ig strand B 2539..2543 CDD:409353
Ig strand C 2552..2556 CDD:409353
Ig strand E 2576..2579 CDD:409353
Ig strand F 2589..2594 CDD:409353
Ig strand G 2603..2606 CDD:409353
IG_like 2627..2703 CDD:214653
Ig strand B 2636..2640 CDD:409353
Ig strand C 2649..2653 CDD:409353
Ig strand E 2670..2674 CDD:409353
Ig strand F 2684..2689 CDD:409353
Ig strand G 2697..2700 CDD:409353
I-set 2766..2845 CDD:400151
Ig strand B 2771..2775 CDD:409353
Ig strand C 2784..2788 CDD:409353
Ig strand F 2821..2826 CDD:409353
PLAC 2851..2883 CDD:462560
adamts6XP_002934253.2 Pep_M12B_propep 43..191 CDD:460254
ZnMc_ADAMTS_like 251..466 CDD:239801
ADAMTS_CR_2 481..549 CDD:465496 15/67 (22%)
TSP1 562..614 CDD:214559 24/51 (47%)
ADAMTS_CR_3 619..717 CDD:437068 55/97 (57%)
ADAMTS_spacer1 720..830 CDD:461796 35/112 (31%)
TSP1_ADAMTS 845..900 CDD:465950 23/54 (43%)
TSP1_ADAMTS 904..960 CDD:465950 23/62 (37%)
TSP1_ADAMTS 964..1018 CDD:465950 20/59 (34%)
TSP1_ADAMTS 1023..1072 CDD:465950 21/48 (44%)
PLAC 1084..1116 CDD:462560 1/3 (33%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.