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Protein Alignment amx and TM2D1
DIOPT Version :9
Sequence 1: | NP_001245591.1 |
Gene: | amx / 43869 |
FlyBaseID: | FBgn0000077 |
Length: | 284 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_114416.1 |
Gene: | TM2D1 / 83941 |
HGNCID: | 24142 |
Length: | 207 |
Species: | Homo sapiens |
Alignment Length: | 151 |
Identity: | 53/151 - (35%) |
Similarity: | 72/151 - (47%) |
Gaps: | 30/151 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 154 GERSFQRQMNCRYCYQTEMWQQSCGQRSSCNSATDKLFR-TNCTVHHDVLCL-----------GN 206
||.|.: |...::.|..| :....|.||.:... ||.|.| |.|. ||
Human 42 GEESLK-------CEDLKVGQYIC-KDPKINDATQEPVNCTNYTAH--VSCFPAPNITCKDSSGN 96
Fly 207 RS-FTRN-------LRCNWTQGYRWSTALLISLTLGGFGADRFYLGHWQEGIGKLFSFGGLGVWT 263
.: ||.| :.|....||.:..|:.:||.||..||||||||:...|:.|..:.|..|:.:
Human 97 ETHFTGNEVGFFKPISCRNVNGYSYKVAVALSLFLGWLGADRFYLGYPALGLLKFCTVGFCGIGS 161
Fly 264 IIDVLLISMHYLGPADGSLYI 284
:||.:||||..:||:|||.||
Human 162 LIDFILISMQIVGPSDGSSYI 182
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
amx | NP_001245591.1 |
TM2 |
219..268 |
CDD:282945 |
21/48 (44%) |
TM2D1 | NP_114416.1 |
TM2 |
117..166 |
CDD:310034 |
21/48 (44%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4272 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
1 |
0.950 |
- |
0 |
Normalized mean entropy |
S5008 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
User_Submission |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.760 |
|
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