DRSC/TRiP Functional Genomics Resources

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Protein Alignment amx and TM2D3

DIOPT Version :9

Sequence 1:NP_001245591.1 Gene:amx / 43869 FlyBaseID:FBgn0000077 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_510883.2 Gene:TM2D3 / 80213 HGNCID:24128 Length:247 Species:Homo sapiens


Alignment Length:185 Identity:95/185 - (51%)
Similarity:119/185 - (64%) Gaps:11/185 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 PYDKETP----CDRLQFPCIRCNYNHGCIYGRDLNVTCEVINNVQCL-----GERSFQRQMNCRY 166
            ||..:.|    |.||...||.|..|..|.||:.:...|.|..:|.|:     .:::|...|.||:
Human    63 PYVMKCPSNGLCSRLPADCIDCTTNFSCTYGKPVTFDCAVKPSVTCVDQDFKSQKNFIINMTCRF 127

  Fly   167 CYQTEMWQQSCGQRSSCN--SATDKLFRTNCTVHHDVLCLGNRSFTRNLRCNWTQGYRWSTALLI 229
            |:|.......|...:||.  |...:.:..||||...|.|||||:|.:.|.||||.||:|||||.:
Human   128 CWQLPETDYECTNSTSCMTVSCPRQRYPANCTVRDHVHCLGNRTFPKMLYCNWTGGYKWSTALAL 192

  Fly   230 SLTLGGFGADRFYLGHWQEGIGKLFSFGGLGVWTIIDVLLISMHYLGPADGSLYI 284
            |:|||||||||||||.|:||:||||||||||:||:||||||.:.|:|||||||||
Human   193 SITLGGFGADRFYLGQWREGLGKLFSFGGLGIWTLIDVLLIGVGYVGPADGSLYI 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amxNP_001245591.1 TM2 219..268 CDD:282945 38/48 (79%)
TM2D3NP_510883.2 TM2 182..231 CDD:282945 38/48 (79%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165152765
Domainoid 1 1.000 92 1.000 Domainoid score I7621
eggNOG 1 0.900 - - E1_KOG4272
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H12275
Inparanoid 1 1.050 196 1.000 Inparanoid score I3817
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1385397at2759
OrthoFinder 1 1.000 - - FOG0005547
OrthoInspector 1 1.000 - - oto90265
orthoMCL 1 0.900 - - OOG6_106920
Panther 1 1.100 - - LDO PTHR21016
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3965
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1413.760

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