DRSC/TRiP Functional Genomics Resources

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Protein Alignment amx and Tm2d2

DIOPT Version :10

Sequence 1:NP_524644.1 Gene:amx / 43869 FlyBaseID:FBgn0000077 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_081470.2 Gene:Tm2d2 / 69742 MGIID:1916992 Length:213 Species:Mus musculus


Alignment Length:283 Identity:60/283 - (21%)
Similarity:97/283 - (34%) Gaps:105/283 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 RSAIVLIMIFVLTGIRNSETASGGNQMDLSDSKGDHKDNSNASNGNGNANDNEVYVPPLVSSMVA 77
            ::|::|..:.:|..:..|.:.:...::||:.|...|.:...||:..                   
Mouse    16 QAALLLGNLLLLHCVSRSHSFNATAELDLTPSGAAHLEGPAASSWE------------------- 61

  Fly    78 KSGGGAGGLLDNITAYSSSSSSSSSNGNNNMLCPY------DKETPCDRLQFPCIRCNYNHGCI- 135
                           ||..:|..       :||.|      |.:.|.|.:..........:||: 
Mouse    62 ---------------YSDPNSPV-------ILCSYLPDEFVDCDAPVDHVGNATASQELGYGCLK 104

  Fly   136 YG-------RDLNVTCEVINNVQCLGERSFQRQMNCRYCYQTEMWQQSCGQRSSCNSATDKLFRT 193
            :|       :...|.|..:..::|...|:|.|:                                
Mouse   105 FGGQAYSDVQHTAVQCRALEGIECASPRTFLRE-------------------------------- 137

  Fly   194 NCTVHHDVLCLGNRSFTRNLRCNWTQGYRWSTALLISLTLGGFGADRFYLGHWQEGIGKLFSFGG 258
                              |..|....|:.:.|.||.|..||.||.|||.|||....:|||.:.||
Mouse   138 ------------------NKPCIKYTGHYFITTLLYSFFLGCFGVDRFCLGHTGTAVGKLLTLGG 184

  Fly   259 LGVWTIIDVLLISMHYLGPADGS 281
            ||:|..:|::|:....|.|:|||
Mouse   185 LGIWWFVDLILLITGGLMPSDGS 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amxNP_524644.1 TM2 219..268 CDD:428337 24/48 (50%)
Tm2d2NP_081470.2 TM2 145..194 CDD:428337 24/48 (50%)

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