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Protein Alignment amx and Tm2d3
DIOPT Version :9
Sequence 1: | NP_001245591.1 |
Gene: | amx / 43869 |
FlyBaseID: | FBgn0000077 |
Length: | 284 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001099737.1 |
Gene: | Tm2d3 / 292995 |
RGDID: | 1564929 |
Length: | 261 |
Species: | Rattus norvegicus |
Alignment Length: | 185 |
Identity: | 93/185 - (50%) |
Similarity: | 119/185 - (64%) |
Gaps: | 11/185 - (5%) |
- Green bases have known domain annotations that are detailed below.
Fly 111 PYDKETP----CDRLQFPCIRCNYNHGCIYGRDLNVTCEVINNVQCLG-----ERSFQRQMNCRY 166
||..:.| |.||...||.|..|..|.||:.:...|.|..:|.|:. :|:|...|.||:
Rat 77 PYMMKCPSNGLCSRLPADCIECATNASCTYGKPVTFDCTVKPSVTCVDQDLRPQRNFVINMTCRF 141
Fly 167 CYQTEMWQQSCGQRSSCNSAT--DKLFRTNCTVHHDVLCLGNRSFTRNLRCNWTQGYRWSTALLI 229
|:|.......|...::|.:.. .:.:..||||...:.|||||:|.:.|.||||.||:|||||.:
Rat 142 CWQLPETDYECSNSTTCMTVACPRQRYFANCTVRDHIHCLGNRTFPKLLYCNWTGGYKWSTALAL 206
Fly 230 SLTLGGFGADRFYLGHWQEGIGKLFSFGGLGVWTIIDVLLISMHYLGPADGSLYI 284
|:|||||||||||||.|:||:||||||||||:||:||||||.:.|:|||||||||
Rat 207 SITLGGFGADRFYLGQWREGLGKLFSFGGLGIWTLIDVLLIGVGYVGPADGSLYI 261
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
amx | NP_001245591.1 |
TM2 |
219..268 |
CDD:282945 |
38/48 (79%) |
Tm2d3 | NP_001099737.1 |
TM2 |
196..245 |
CDD:377473 |
38/48 (79%) |
Information from Original Tools:
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