DRSC/TRiP Functional Genomics Resources

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Protein Alignment amx and tm2d1

DIOPT Version :10

Sequence 1:NP_524644.1 Gene:amx / 43869 FlyBaseID:FBgn0000077 Length:284 Species:Drosophila melanogaster
Sequence 2:XP_004914000.1 Gene:tm2d1 / 100494081 XenbaseID:XB-GENE-970681 Length:192 Species:Xenopus tropicalis


Alignment Length:177 Identity:51/177 - (28%)
Similarity:71/177 - (40%) Gaps:52/177 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 CDRL---QFPCIRCNYNHGCIYGRDLNVTCEVINNVQCLGERSFQRQMNC-RY-----CYQTEMW 173
            ||.|   ||.|:....|                        .:.|..:|| .|     |:...  
 Frog    33 CDELRLGQFICVDPEIN------------------------PATQEPVNCSNYTADAPCFPAP-- 71

  Fly   174 QQSCGQRSSCNSATDKLFRTNCTVHHDVLCLGNR-SFTRNLRCNWTQGYRWSTALLISLTLGGFG 237
                       :.|.|::..|.|..     .|.. .|.|...|....||.:..|:.:||.||..|
 Frog    72 -----------NITCKVYGGNVTTF-----TGKEIGFYRPFPCRNVNGYSYKVAVALSLFLGWLG 120

  Fly   238 ADRFYLGHWQEGIGKLFSFGGLGVWTIIDVLLISMHYLGPADGSLYI 284
            |||||||:...|:.|..:.|..|:.:::|.:||||..:||:|||.||
 Frog   121 ADRFYLGYPALGMLKFCTVGFCGIGSLLDFILISMQIVGPSDGSSYI 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amxNP_524644.1 TM2 219..268 CDD:428337 20/48 (42%)
tm2d1XP_004914000.1 TM2 102..151 CDD:428337 20/48 (42%)

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