DRSC/TRiP Functional Genomics Resources

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Protein Alignment amx and tm2d3

DIOPT Version :10

Sequence 1:NP_524644.1 Gene:amx / 43869 FlyBaseID:FBgn0000077 Length:284 Species:Drosophila melanogaster
Sequence 2:XP_002937906.1 Gene:tm2d3 / 100145816 XenbaseID:XB-GENE-5805754 Length:247 Species:Xenopus tropicalis


Alignment Length:234 Identity:104/234 - (44%)
Similarity:135/234 - (57%) Gaps:24/234 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 VSSMVAKSGGG----------AGGLLDNITAYSSSSSSSSSNGNNNMLCPYDKETP----CDRLQ 122
            ::.|...||.|          |..|.|:   :.||:.::|:......:..|.::.|    |.||.
 Frog    17 ITQMYVLSGRGFLSFEYSEPVAQPLKDH---FPSSTIATSTRATATKIPDYMEKCPSNGQCSRLP 78

  Fly   123 FPCIRCNYNHGCIYGRDLNVTCEVINNVQCLGERS-----FQRQMNCRYCYQTEMWQQSCGQRSS 182
            ..|:.|..|:.||||:.:...|...|.|.|....|     |...|.|::|:|.......|...||
 Frog    79 SDCMTCATNYSCIYGKPVTFNCTAKNGVVCFDVNSQPQEYFTISMTCQFCWQLPPSDYVCNLSSS 143

  Fly   183 CN--SATDKLFRTNCTVHHDVLCLGNRSFTRNLRCNWTQGYRWSTALLISLTLGGFGADRFYLGH 245
            |.  |...:.:.|.|||.....|||||:|.:.|.||||.||:|||||.:|:|||||||||||||.
 Frog   144 CKTVSCPRQRYNTTCTVLDHAHCLGNRTFPKMLYCNWTGGYKWSTALALSITLGGFGADRFYLGQ 208

  Fly   246 WQEGIGKLFSFGGLGVWTIIDVLLISMHYLGPADGSLYI 284
            |:||:||||||||||:||:|||.|||:.|:|||||||||
 Frog   209 WREGLGKLFSFGGLGIWTLIDVFLISVGYVGPADGSLYI 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amxNP_524644.1 TM2 219..268 CDD:428337 38/48 (79%)
tm2d3XP_002937906.1 TM2 182..231 CDD:428337 38/48 (79%)

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