DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Atf3 and fosb

DIOPT Version :9

Sequence 1:NP_001259125.1 Gene:Atf3 / 43867 FlyBaseID:FBgn0028550 Length:688 Species:Drosophila melanogaster
Sequence 2:XP_005173698.1 Gene:fosb / 492346 ZFINID:ZDB-GENE-041114-181 Length:411 Species:Danio rerio


Alignment Length:432 Identity:109/432 - (25%)
Similarity:183/432 - (42%) Gaps:84/432 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 FSYSSAAAAAAAVSV--------------ASSSASCSAASTPVVTVRHFNGHPNGQSHSQDSSHS 95
            ||..:...:|:..|:              :..|:|.|..|..:.:|..| |.|...|..|:...:
Zfish    26 FSPGTVGVSASLGSIGDMFQGFPGDPDTGSRGSSSPSLESQYLSSVESF-GSPPTTSAPQECVTA 89

  Fly    96 S--------CSGSPLDSPAG---TATTPSVQQTCSRLIKEGLKLSIQSKRKLSTCDSSSGSEQPH 149
            :        .:|:.:|.|:.   |.|..:..|....:::..|..|:      :...|.:||....
Zfish    90 TGGVGVGGGSTGAGVDMPSSFVPTVTAITTSQDLQWMVQPTLISSV------APGQSGTGSSTMT 148

  Fly   150 SKYSRRSSNHNGHSGSSNNYSGSMSNANDLDDDCEESSDDDSETKSQPKGLTPEDEDRRRRRRER 214
            ...:....:..|.|.||..::...|   |......:|.   |..:::.:.||||:|::||.||||
Zfish   149 QPVALDPYDLPGPSFSSGGFTPPSS---DTPGPVRQSR---SRRRARDETLTPEEEEKRRVRRER 207

  Fly   215 NKIAATKCRMKKRERTQNLIKESEVLDTQNVELKNQVRQLETERQKLVDMLKSHGCQRAGGCQLP 279
            ||:||.|||.::||.|..|..|:::|:.:..||:.::.:|:.|:::|..:|.:|    ..||:||
Zfish   208 NKLAAAKCRNRRRELTDRLQSETDILEEEKAELEAEISELQKEKERLEFVLVAH----QPGCKLP 268

  Fly   280 SQLLQSPAQKYLSELELETVSIDGPNSGNNNQRLQSIPSMATFKYGSKTAAAMAQQLPNGYCKPS 344
            .| .|.||....:..:..:||:.|                .|.|..|            .|..|:
Zfish   269 YQ-DQPPAPLPQTSPQAPSVSVVG----------------LTVKEDS------------FYLPPA 304

  Fly   345 PSAQEFEHAGYQQQQQ------QQQQQQPQSLNPAGNNVIDQQHANPSPSLLSDYVPNCDGLTGS 403
            .|:....|....|..|      ||||...|.:..:.:.....|.|...|.|::|...|.|    :
Zfish   305 YSSHHHHHVPVSQPTQTQPAPAQQQQGMMQEVAFSSSFYGPGQPAPDGPCLVADGGGNPD----A 365

  Fly   404 ASNHPSHNNN---NNNNNSSGASSNTSNNNSNISSHSSNATS 442
            .|..||:.::   .....:.|||:|...::|:.||.|.|:.|
Zfish   366 GSYIPSYTSSFVFTYPEGACGASANQRTSSSDQSSDSLNSPS 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atf3NP_001259125.1 bZIP_ATF3 215..268 CDD:269870 19/52 (37%)
coiled coil 215..265 CDD:269870 18/49 (37%)
fosbXP_005173698.1 bZIP_Fos 208..261 CDD:269869 19/52 (37%)
coiled coil 208..260 CDD:269869 19/51 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576081
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1414
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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