DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL10 and SAG24

DIOPT Version :9

Sequence 1:NP_001262233.1 Gene:RpL10 / 43864 FlyBaseID:FBgn0024733 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_564878.1 Gene:SAG24 / 842976 AraportID:AT1G66580 Length:221 Species:Arabidopsis thaliana


Alignment Length:207 Identity:144/207 - (69%)
Similarity:165/207 - (79%) Gaps:0/207 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQLSSEAL 65
            ||||||||||..|.|||||||:|||||||||||:|:|.|:..|::||.||||||.|.|.:|||||
plant     1 MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEAL 65

  Fly    66 EAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVR 130
            ||.||.||||:||..|||.||:|:|:|||||:||||||||||||||||||||||||..||.|||.
plant    66 EAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKALGTCARVA 130

  Fly   131 IGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERERYEELRDDNRLEPDGC 195
            |||.::|||..|.:.....||||||||||||||||.||:||||||:.|..|.:||...|:.|||.
plant   131 IGQVLLSVRCKDNHGVHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAEYTKLRAMKRIVPDGV 195

  Fly   196 NVKYRPEHGPIA 207
            |.|:...|||:|
plant   196 NAKFLSNHGPLA 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL10NP_001262233.1 PTZ00173 1..213 CDD:185498 144/207 (70%)
SAG24NP_564878.1 PTZ00173 1..211 CDD:185498 144/207 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 235 1.000 Domainoid score I622
eggNOG 1 0.900 - - E1_COG0197
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 305 1.000 Inparanoid score I758
OMA 1 1.010 - - QHG62276
OrthoDB 1 1.010 - - D1215841at2759
OrthoFinder 1 1.000 - - FOG0002057
OrthoInspector 1 1.000 - - otm3190
orthoMCL 1 0.900 - - OOG6_100701
Panther 1 1.100 - - O PTHR11726
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1358
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.840

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