DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL10 and Hspbp1

DIOPT Version :9

Sequence 1:NP_001262233.1 Gene:RpL10 / 43864 FlyBaseID:FBgn0024733 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_001347558.1 Gene:Hspbp1 / 66245 MGIID:1913495 Length:357 Species:Mus musculus


Alignment Length:136 Identity:30/136 - (22%)
Similarity:56/136 - (41%) Gaps:20/136 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 EAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQ--GTVAR 128
            |||       |:::...|.|.:.||.....|    :.|....|..||..:   .|.|:  ||:..
Mouse   218 EAG-------LLQFLRLDGFSVLMRAMQQQV----QKLKVKSAFLLQNLL---VGHPEHKGTLCS 268

  Fly   129 VRIGQPIMSVRSSDR--YKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERERYEEL--RDDNR 189
            :.:.|.::::..::.  :...|:.||......||...:.....:.|..:..|.|.:.|  |::.:
Mouse   269 MGMVQQLVALVRTEHSPFHEHVLGALCSLVTDFPQGVRECREPELGLEELLRHRCQLLQQREEYQ 333

  Fly   190 LEPDGC 195
            .|.:.|
Mouse   334 EELEFC 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL10NP_001262233.1 PTZ00173 1..213 CDD:185498 30/136 (22%)
Hspbp1NP_001347558.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..68
Fes1 43..137 CDD:369996
ARM 1 130..172
armadillo repeat 135..172 CDD:293788
ARM 2 175..215
armadillo repeat 178..213 CDD:293788
ARM 3 218..257 13/52 (25%)
armadillo repeat 231..255 CDD:293788 7/27 (26%)
ARM 4 260..299 7/38 (18%)
armadillo repeat 263..299 CDD:293788 6/35 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0197
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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