DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL10 and mRpL16

DIOPT Version :10

Sequence 1:NP_651954.3 Gene:RpL10 / 43864 FlyBaseID:FBgn0024733 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_525041.1 Gene:mRpL16 / 31150 FlyBaseID:FBgn0023519 Length:243 Species:Drosophila melanogaster


Alignment Length:198 Identity:39/198 - (19%)
Similarity:71/198 - (35%) Gaps:49/198 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 YRYCKNKPYPKSRFCRGVPD--PKIRIFDLGRKKATVEDFPLCVH--LVSDEYEQLSSEALEAGR 69
            |:..:....||.|.....|.  |.||...: :|:......|..||  |:   ::|.:..|...||
  Fly    37 YQNVEQPERPKLRVIERQPQLPPNIRPPKM-QKRLRYMRGPEMVHNTLL---HKQYAIVATGGGR 97

  Fly    70 ICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKM------------LSCAGADRLQTGMRGAFGKP 122
            :....|.:           |||.....:.:|.|            ::..|..:...|.:||.   
  Fly    98 LRWGHYEM-----------MRLTIGRKMNVNTMFATWRVPAPWQPITKKGQGQRMGGGKGAI--- 148

  Fly   123 QGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERERYEELRDD 187
            ...|..::.|:.|:.:.....: .:|.:.|::...:.| .|...||             :|:.|:
  Fly   149 DHYVTPIKAGRVIVEIAGKCEF-VEVKQFLQQVANQLP-FQATVVS-------------QEMLDE 198

  Fly   188 NRL 190
            .|:
  Fly   199 QRV 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL10NP_651954.3 PTZ00173 1..213 CDD:185498 39/198 (20%)
mRpL16NP_525041.1 Ribosomal_L16 61..191 CDD:459733 28/149 (19%)

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