DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL10 and Sil1

DIOPT Version :9

Sequence 1:NP_001262233.1 Gene:RpL10 / 43864 FlyBaseID:FBgn0024733 Length:218 Species:Drosophila melanogaster
Sequence 2:XP_038952645.1 Gene:Sil1 / 291673 RGDID:735103 Length:489 Species:Rattus norvegicus


Alignment Length:155 Identity:31/155 - (20%)
Similarity:51/155 - (32%) Gaps:59/155 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGRRPARCYRYCKNK----PYP----KSRFCRGVPDPKIRIFDLGRK--KATVEDFPL-----CV 50
            :|:|.......|:.|    |.|    :.:..:||...:.:.|::..|  |....:|.|     ..
  Rat     7 LGQRAVNLKLTCRPKMLEMPEPWDTCQGKLLKGVELAQEKEFNVVNKDEKGGENNFALTNPEKST 71

  Fly    51 HLVSD-----EYEQLSSEALE------------------AGRICCNKYLVKYCGKDQFHIRMRLH 92
            |..||     ..|:|.:|.||                  ||.                |:||.|.
  Rat    72 HEDSDTKETRREEELDAEVLEVLNPTQEWQALQPGQAVPAGS----------------HVRMNLQ 120

  Fly    93 PFHVIRINKMLSCAGADRLQTGMRG 117
                ..:|: :.....|:.|:..:|
  Rat   121 ----TGVNE-VKLQQEDKFQSNWKG 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL10NP_001262233.1 PTZ00173 1..213 CDD:185498 31/155 (20%)
Sil1XP_038952645.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0197
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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