DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpL10 and rpl1002

DIOPT Version :10

Sequence 1:NP_651954.3 Gene:RpL10 / 43864 FlyBaseID:FBgn0024733 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_594315.1 Gene:rpl1002 / 2541678 PomBaseID:SPAP7G5.05 Length:221 Species:Schizosaccharomyces pombe


Alignment Length:206 Identity:143/206 - (69%)
Similarity:168/206 - (81%) Gaps:0/206 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQLSSEAL 65
            |.|||||||||||||||||||:.|.|||.||||||||||:|.|::||||:||||:||||::||||
pombe     1 MARRPARCYRYCKNKPYPKSRYNRAVPDSKIRIFDLGRKRAGVDEFPLCIHLVSNEYEQITSEAL 65

  Fly    66 EAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVR 130
            ||.|||.||||||..|||.||:|:|.|||||:|||||||||||||||||||.|||||.|.||||.
pombe    66 EAARICANKYLVKIGGKDSFHLRVRAHPFHVVRINKMLSCAGADRLQTGMRHAFGKPNGLVARVN 130

  Fly   131 IGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERERYEELRDDNRLEPDGC 195
            |||.:||||:.|..:|..||||||.::||||:|:|.|||||||::|.|:.|.|.|....:.||||
pombe   131 IGQVLMSVRTKDSSRATAIEALRRCQYKFPGQQRIIVSKKWGFSQYARDEYIEKRSRGEIIPDGC 195

  Fly   196 NVKYRPEHGPI 206
            ..|:..:.|.:
pombe   196 YAKFLNKRGSL 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL10NP_651954.3 PTZ00173 1..213 CDD:185498 143/206 (69%)
rpl1002NP_594315.1 PTZ00173 1..207 CDD:185498 143/206 (69%)

Return to query results.
Submit another query.