DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL10 and mrpl-16

DIOPT Version :10

Sequence 1:NP_651954.3 Gene:RpL10 / 43864 FlyBaseID:FBgn0024733 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_497965.2 Gene:mrpl-16 / 188040 WormBaseID:WBGene00011412 Length:240 Species:Caenorhabditis elegans


Alignment Length:158 Identity:32/158 - (20%)
Similarity:61/158 - (38%) Gaps:28/158 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 YEQLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGK 121
            :||....|:..|.|..:.:  |:. :|:.:..:..:.|.|.|::............|.:.|..|.
 Worm    83 HEQYGLAAVSGGFIDSDDF--KFI-QDRINKNLIDNQFSVWRVDAPWLPRTKKAQGTRLGGGKGS 144

  Fly   122 PQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRA-------KFKFPGRQKIYVSKKWGFTKYERE 179
            .|..|..||..:.|:.|      ...:.|...:|       :|.||..   :||:     ....|
 Worm   145 IQKYVTPVRANRIILEV------GGHITEIEAKAFLLYLCERFSFPVE---FVSE-----TMLAE 195

  Fly   180 RYEELRDDNRLEPDGCN----VKYRPEH 203
            |.::..::..:..:|.|    :||..::
 Worm   196 RRKKAEEERAMNKNGFNWGKVIKYNMQN 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL10NP_651954.3 PTZ00173 1..213 CDD:185498 32/158 (20%)
mrpl-16NP_497965.2 Ribosomal_L16 60..188 CDD:459733 24/116 (21%)

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