DRSC/TRiP Functional Genomics Resources

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Protein Alignment HnRNP-K and PEP

DIOPT Version :9

Sequence 1:NP_995906.1 Gene:HnRNP-K / 43862 FlyBaseID:FBgn0267791 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_194330.1 Gene:PEP / 828706 AraportID:AT4G26000 Length:495 Species:Arabidopsis thaliana


Alignment Length:505 Identity:87/505 - (17%)
Similarity:149/505 - (29%) Gaps:216/505 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 RILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDS--QGPERTIQISAD----------IESTL 84
            |:::|.:..||:||:.|..|:||..:.:|.:.|.|.  ..|:|.:.||..          :::.|
plant    77 RMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLISGKEEPEAYMSPAMDAVL 141

  Fly    85 EIITEMLKYFEERDEDF--------DVRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNV 141
            .:...:....:..|:|.        .||||:..:.|..:|||.|..||.|.:..|.....:....
plant   142 RVF
RRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQAINLIGKQGSLIKSIVENSGASVRILSEEE 206

  Fly   142 AP---QSTDRVVQTVGKQSQVIEAVREVITLTRDTPIKGAIHNYDPMNFDRVYADEYGGYGTGSG 203
            .|   ...:|:|...|:..::::|:..::...|...:.   |...|: |::.|            
plant   207 TPFYAAQDERIVDLQGEALKILKALEAIVGHLRRFLVD---HTVVPL-FEKQY------------ 255

  Fly   204 STRPSQRGNNRNGGGAGGVAGGAAGGNGGGFNAGGARGNAGGRGGADRFGGAAGGAVAGAGMGQR 268
                                                                    :|.....::
plant   256 --------------------------------------------------------LARVSQTRQ 264

  Fly   269 DNPFINPWANGGGGDVDGFGNNAGGAGGFAGNSFGGGAGGPFGGGSFGNNGFGGGPSDFGGNSGN 333
            :.|.                                                             
plant   265 EEPL------------------------------------------------------------- 268

  Fly   334 FGQAQGTNSLPSLGS----------------FSQNQGGTSS--LPS-LGSFGQNPGGPGGLGNGL 379
               |:..:||.::.|                |.:......|  .|| :..:.|:|        .|
plant   269 ---AESKSSLHTISSNLMEPDFSLLARREPLFLERDSRVDSRVQPSGVSIYSQDP--------VL 322

  Fly   380 SGGANGGVGTLGGANGAGGFNAVGGANGGPNGSPNAATNVPQGHDPNNSTQVTIPKELAGAIIGK 444
            |...:.|:..:..|                     ..|.|.|        .:.||...|..|||.
plant   323 SARHSPGLARVSSA---------------------FVTQVSQ--------TMQIPFSYAEDIIGV 358

  Fly   445 GGGRIRRIRNESSAYITIDEPLPNSNDRIITISGTPKQIQMAQYLLQQSV 494
            .|..|..||..|.|.|||.|. |:.:...:.|.||..|:|.|:.|:|:.:
plant   359 EGANIAYIRRRSGATITIKES-PHPDQITVEIKGTTSQVQTAEQLIQEFI 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HnRNP-KNP_995906.1 PCBP_like_KH 30..91 CDD:239089 18/70 (26%)
PCBP_like_KH 103..167 CDD:239089 18/66 (27%)
PEPNP_194330.1 PCBP_like_KH 75..144 CDD:239089 18/66 (27%)
PCBP_like_KH 167..235 CDD:239089 18/67 (27%)
KH_1 343..405 CDD:365809 25/70 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10288
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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