DRSC/TRiP Functional Genomics Resources

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Protein Alignment HnRNP-K and PCBP4

DIOPT Version :9

Sequence 1:NP_995906.1 Gene:HnRNP-K / 43862 FlyBaseID:FBgn0267791 Length:502 Species:Drosophila melanogaster
Sequence 2:XP_024309446.1 Gene:PCBP4 / 57060 HGNCID:8652 Length:481 Species:Homo sapiens


Alignment Length:533 Identity:95/533 - (17%)
Similarity:153/533 - (28%) Gaps:263/533 - (49%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 TVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDSQGPERTIQISADIESTLEIITEMLKYF 94
            |:|:|:.....|::|||.|:.::::|.|..|.:::.:...|||...|:....:....:: |:.: 
Human    42 TLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVS-MIAF- 104

  Fly    95 EERDEDF---------------DVRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRF---------- 134
             :.|||.               .:||:|..|..|.:|||.|.||||||:..|..:          
Human   105 -KLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIREVRGEIYHPQGIRGKGA 168

  Fly   135 --------------------------------------------LKVFSNVAPQSTDRVVQTVGK 155
                                                        ::|..::.|.||:|.|...|.
Human   169 VVRGVLGLWRPPHLESSEPGQPFSGLWEQPEVAPVLCLQTTGAQVQVAGDLLPNSTERAVTVSGV 233

  Fly   156 QSQVIEAVREVITLTRDTPIKGAIHNYDPMNFDRVYADEYGGYGTGSGSTRPSQRGNNRNGGGAG 220
            ...:|..||::..:..::|.|||...|.|            ....|:.....:|           
Human   234 PDAIILCVRQICAVILESPPKGATIPYHP------------SLSLGTVLLSANQ----------- 275

  Fly   221 GVAGGAAGGNGGGFNAGGARGNAGGRGGADRFGGAAGGAVAGAGMGQRDNPFINPWANGGGGDVD 285
                        ||:..|..                 |||..|.:                    
Human   276 ------------GFSVQGQY-----------------GAVTPAEV-------------------- 291

  Fly   286 GFGNNAGGAGGFAGNSFGGGAGGPFGGGSFGNNGFGGGPSDFGGNSGNFGQAQGTNSLPSLGSFS 350
                                                                             
Human   292 ----------------------------------------------------------------- 291

  Fly   351 QNQGGTSSLPSLGSFGQNPGGPGGLGNGLSGGANGGVGTLGGANGAGGFNAVGGANGGPNGSPNA 415
                  :.|..|.|                                   :||          |.|
Human   292 ------TKLQQLSS-----------------------------------HAV----------PFA 305

  Fly   416 ATNVPQGHDPNNST---QVTIPKELAGAIIGKGGGRIRRIRNESSAYITIDEPLPNSNDRIITIS 477
            ..:|..|.||...|   :..:|.:|.|.:||:.|.:|..||..|.|:|.|......:.:|.:||:
Human   306 TPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTIT 370

  Fly   478 GTPKQIQMAQYLL 490
            |:|..|.:||||:
Human   371 GSPVSIALAQYLI 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HnRNP-KNP_995906.1 PCBP_like_KH 30..91 CDD:239089 15/60 (25%)
PCBP_like_KH 103..167 CDD:239089 26/117 (22%)
PCBP4XP_024309446.1 PCBP_like_KH 42..103 CDD:239089 16/61 (26%)
PCBP_like_KH 126..245 CDD:239089 26/118 (22%)
KH_1 321..385 CDD:306517 23/63 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1164
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.940

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