Protein Alignment HnRNP-K and Pcbp3

DIOPT Version :10

• Sequence 1: NP_995906.1
• Gene: HnRNP-K / 43862
• FlyBaseID: FBgn0267791
• Length: 502
• Species: Drosophila melanogaster
• Sequence 2: XP_006256345.1
• Gene: Pcbp3 / 294336
• RGDID: 1307430
• Length: 394
• Species: Rattus norvegicus
• Alignment Length: 488
• Identity: 108/488 - (22%)
• Similarity: 168/488 - (34%)
• Gaps: 181/488 - (37%)

  Fly    30 TVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDSQGPERTIQISADIESTLEIITEMLKYF 94
            |:|:|:.....|::|||.|:.::|||.:..|.:::.:...|||.:.|:...::..:....:...|
  Rat    47 TIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKF 111

  Fly    95 EE------------RDEDFDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTD 147
            ||            ......:||::..|..|.:|||||.||||||:..|.: ::|..::.|.||:
  Rat   112 EEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ-VQVAGDMLPNSTE 175

  Fly   148 RVVQTVGKQSQVIEAVREVITLTRDTPIKGAIHNYDPMNFDRVYADEYGGYGTGSGSTRPSQRGN 212
            |.|...|....:|:.|:::..:..::|.|||...|.|                     :|
  Rat   176 RAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRP---------------------KP----- 214

  Fly   213 NRNGGGAGGVAGGAAGGNGGGFNAGGARGNAGGRGGADRFGGAAGGAVAGAGMGQRDNPFINPWA 277
                                                       |...|..||...|.:|
  Rat   215 -------------------------------------------ASTPVIFAGGQVRADP------ 230

  Fly   278 NGGGGDVDGFGNNAGGAGGFAGNSFGGGAGGPFGGGSFGNNGFGGGPSDFGGNSGNFG------- 335
                                                             ...::.|..
  Rat   231 -------------------------------------------------LAASTANLSLLLQHPP 246

  Fly   336 ----QAQGTNSLP---SLGSFSQNQGGTSSLPSLGSFGQNPGGPG-GLGNGLSGGANGGVGTLGG 392
                ..||..::|   .|....|.....:..|.||.  .||..|| .|....|..|..
  Rat   247 LPAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQ--TNPAFPGEKLPLHSSEEAQN------- 302

  Fly   393 ANGAGGFNAVGGANGGPNGSPNAATNVPQGHDPNNSTQVTIPKELAGAIIGKGGGRIRRIRNESS 457
                     :.|.:.|.:.||.|:|:           ::|||.:|.|.|||:.|.:|..||..|.
  Rat   303 ---------LMGQSSGLDASPPASTH-----------ELTIPNDLIGCIIGRQGTKINEIRQMSG 347

  Fly   458 AYITIDEPLPNSNDRIITISGTPKQIQMAQYLL 490
            |.|.|......|::|.|||:|||..|.:||||:
  Rat   348 AQIKIANATEGSSERQITITGTPANISLAQYLI 380

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HnRNP-K	NP_995906.1	KH-I_HNRNPK_rpt1	28..91	CDD:411860	16/60 (27%)
		KH-I_HNRNPK_rpt2	100..170	CDD:411861	25/69 (36%)
		KH-I_HNRNPK_rpt3	426..498	CDD:411862	29/65 (45%)
Pcbp3	XP_006256345.1	KH-I_PCBP3_rpt1	38..114	CDD:411944	18/66 (27%)
		KH-I_PCBP3_rpt2	125..203	CDD:411947	25/78 (32%)
		KH-I_PCBP3_rpt3	309..383	CDD:411950	34/83 (41%)