Protein Alignment HnRNP-K and rnc1

DIOPT Version :9

• Sequence 1: NP_995906.1
• Gene: HnRNP-K / 43862
• FlyBaseID: FBgn0267791
• Length: 502
• Species: Drosophila melanogaster
• Sequence 2: NP_587684.1
• Gene: rnc1 / 2539434
• PomBaseID: SPCC757.09c
• Length: 398
• Species: Schizosaccharomyces pombe
• Alignment Length: 500
• Identity: 104/500 - (20%)
• Similarity: 166/500 - (33%)
• Gaps: 201/500 - (40%)

  Fly    18 PQDQKRNRRNEETVRILIPSSIAGAVIGKGGQHIQKMR--TQYKATVSVDDSQGPERTIQISADI 80
            |.|.......:.|:|.|:.:..||.:|||.|:::.::|  |..||.|:.......:|.:.||..:
pombe    83 PMDDATYATQQLTLRALLSTREAGIIIGKAGKNVAELRSTTNVKAGVTKAVPNVHDRVLTISGPL 147

  Fly    81 ESTLEIITEMLKYFEERDEDFD-----------VRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRF 134
            |:.:.....::..|.:...:.|           :||||..||.|.:||:.|.:||.|:|:..||.
pombe   148 ENVVRAYRFIIDIFAKNSTNPDGTPSDANTPRKLRLLIAHSLMGSIIGRNGLRIKLIQDKCSCRM 212

  Fly   135 LKVFSNVAPQSTDRVVQTVGKQSQVIEAVREVITLTRDTPIKGAIHNYDPMNFDRVYADEYGGYG 199
            : ...::.||||:|.|:..|....:..|:.|:                     .:...|::
pombe   213 I-ASKDMLPQSTERTVEIHGTVDNLHAAIWEI---------------------GKCLIDDW---- 251

  Fly   200 TGSGSTRPSQRGNNRNGGGAGGVAGGAAGGNGGGFNAGGARGNAGGRGGADRFGGAAGGAVAGAG 264
                     :|       |||.|
pombe   252 ---------ER-------GAGTV------------------------------------------ 258

  Fly   265 MGQRDNPFINPWANGGGGDVDGFGNNAGGAGGFAGNSFGGGAGGPFGGGSFGNNGFGGGPSDFGG 329
                   |.||
pombe   259 -------FYNP------------------------------------------------------ 262

  Fly   330 NSGNFGQAQGTNSLPSLGS-FSQNQGGTSSLPSLGSFGQNPGGPGGLGNGLSGGANGGVGTLGGA 393
                  .::.|..||||.| .|..|....:.||..|      |.....|.:|.||
pombe   263 ------VSRLTQPLPSLASTASPQQVSPPAAPSTTS------GEAIPENFVSYGA---------- 305

  Fly   394 NGAGGFNAVGGANGGPNGSPNAATNVPQGHDPNNSTQVTIPKELAGAIIGKGGGRIRRIRNESSA 458
                              ....||.:|....|..:..::||.::.|.|||:||.:|..||..|.:
pombe   306 ------------------QVFPATQMPFLQQPKVTQNISIPADMVGCIIGRGGSKISEIRRTSGS 352

  Fly   459 YITI-DEPLPNSNDRIITISGTPKQIQMAQYLLQQSVH-ENGRRN 501
            .|:| .||...:.:|:.||:||.::.:.|.:||.|.:. |..||:
pombe   353 KISIAKEPHDETGERMFTITGTHEENEKALFLLYQQLEMEKDRRS 397

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HnRNP-K	NP_995906.1	PCBP_like_KH	30..91	CDD:239089	18/62 (29%)
		PCBP_like_KH	103..167	CDD:239089	25/63 (40%)
rnc1	NP_587684.1	PCBP_like_KH	95..158	CDD:239089	18/62 (29%)
		PCBP_like_KH	181..243	CDD:239089	24/62 (39%)
		KH-I	322..385	CDD:238053	22/62 (35%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	126	1.000	Inparanoid score	I1448
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	LDO	PTHR10288
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1164
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	4.090