DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nej and SPT7

DIOPT Version :9

Sequence 1:NP_001188575.1 Gene:nej / 43856 FlyBaseID:FBgn0261617 Length:3282 Species:Drosophila melanogaster
Sequence 2:NP_009637.1 Gene:SPT7 / 852373 SGDID:S000000285 Length:1332 Species:Saccharomyces cerevisiae


Alignment Length:1049 Identity:201/1049 - (19%)
Similarity:331/1049 - (31%) Gaps:359/1049 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly  1528 AAARDNDDETPSPSGENT---NGSGGSGNAGGMASKGKLDSIKQDDD--------IKKEFMDDSC 1581
            |...|.|||..:...::|   |......|...::|    .:|:.||:        |.||.: ...
Yeast   233 AEDEDYDDEDENYDEDSTDVKNVDDPPKNLDSISS----SNIEIDDERRLVLNISISKETL-SKL 292

  Fly  1582 GGNNDSSQMDCSTGGGKGK---NVNNDGTSMIK-MEIKTEDGLDGEVKIKTEAMDVDEAGGSTAG 1642
            ..||....|     |...|   :...|..:||| ::::..|.:..:.|.|....|::.|......
Yeast   293 KTNNVEEIM-----GNWNKIYHSFEYDKETMIKRLKLEESDKMIEKGKKKRSRSDLEAATDEQDR 352

  Fly  1643 EHHG------------EGGGGSGVGG--------------GKDNINGAH------DGGATGGAVD 1675
            |:..            ||...|..|.              |.:|::..|      ...:..|..|
Yeast   353 ENTNDEPDTNQKLPTPEGSTFSDTGNKRPKQSNLDLTVNLGIENLSLKHLLSSIQQKKSQLGISD 417

  Fly  1676 IKPKTETKPLVPEPLAPNAGDKKKKCQFNPEELRTALLPTLEKLYRQEPESVPFRYPVDPQALGI 1740
            .    |.|.|:.: :..|........:...|||..|....:.:|......|.||...|..:.  .
Yeast   418 Y----ELKHLIMD-VRKNRSKWTSDERIGQEELYEACEKVVLELRNYTEHSTPFLNKVSKRE--A 475

  Fly  1741 PDYFEIVKKPMDLGTIRTNIQNGKYSDPWEYVDDVWLMFDNAWLYN---------------RKTS 1790
            |:|.:|:||.|||.|:...:::.:|....|:|||:.|::.|...||               :|:.
Yeast   476 PNYHQIIKKSMDLNTVLKKLKSFQYDSKQEFVDDIMLIWKNCLTYNSDPSHFLRGHAIAMQKKSL 540

  Fly  1791 RVYRYCTKLS-----------EVFEA----EIDPVMQALGYCCGRK------------------- 1821
            ::.|....::           |..|.    |:|...:..|  .|||                   
Yeast   541 QLIRMIPNITIRNRADLEKEIEDMEKDKDYELDEEEEVAG--SGRKGLNMGAHMLAKENGKVSEK 603

  Fly  1822 ---YTFNPQVLCCYGKQLCTIPRDAKYYS-------------YQNSLKEYG--------VASNRY 1862
               .|...:......|....||...|...             .:|.:||.|        ..|::.
Yeast   604 DSSKTVKDEAPTNDDKLTSVIPEGEKEKDKTASSTVTVHENVNKNEIKENGKNEEQDMVEESSKT 668

  Fly  1863 TYCQKCFNDIQGDTVTLGDDPLQSQTQIKKD-----QFKEMKNDHLELEPFVNCQ------ECGR 1916
            ....|..:..:.||    :|.||.:|...|:     :.:|..:|..|.|..|:.|      :..|
Yeast   669 EDSSKDADAAKKDT----EDGLQDKTAENKEAGENNEEEEDDDDEDEDEDMVDSQSYLLEKDDDR 729

  Fly  1917 KQHQICVLWLDSIW---PGGFVCDNCLKK----KNSKRK-------ENKFNAKRLPTTKLGVYIE 1967
            ...:|      |:|   ......:.|||:    ||.|..       :|....||.....| .|.|
Yeast   730 DDLEI------SVWKTVTAKVRAEICLKRTEYFKNGKLNSDSEAFLKNPQRMKRFDQLFL-EYKE 787

  Fly  1968 TRV---------------NNF---LKKKEAGAGEVHIRVVSSSDKCVEVKPG----MRRRFVEQG 2010
            .:.               |.|   ||:::....:.|.....:.::..|.:|.    ...||:::.
Yeast   788 QKALESYRQKIEQNSIMKNGFGTVLKQEDDDQLQFHNDHSLNGNEAFEKQPNDIELDDTRFLQEY 852

  Fly  2011 EMMNEFP------YRAKALFAFEEV-------DGID----------------------------- 2033
            ::.|..|      ...|.|...|:.       :||:                             
Yeast   853 DISNAIPDIVYEGVNTKTLDKMEDASVDRMLQNGINKQSRFLANKDLGLTPKMNQNITLIQQIRH 917

  Fly  2034 VCFFGMHVQEYGSECPAPNTRRVYIAYL-----------DSVHFFRPRQYRTAVY---HEILLGY 2084
            :|.....::...|...|.|:|....|:|           ||:......|..|..|   .|::..:
Yeast   918 ICHKISLIRMLQSPLSAQNSRSNPNAFLNNHIYNYTIIDDSLDIDPVSQLPTHDYKNNRELIWKF 982

  Fly  2085 MDYVKQL-------GYTMAHIWACPPSE-------GDDYIFHC-------HPT------------ 2116
            |.  |.:       |:..||     ||.       ..||:.:.       |.|            
Yeast   983 MH--KNISKVAMANGFETAH-----PSAINMLTEIAGDYLSNLIKTLKLHHETNSLNRGTNVEML 1040

  Fly  2117 -----DQKIPKP---------------KRLQEWYKKMLDKGMIERIIQDYKDILKQAMEDKLGSA 2161
                 :..|.:|               |:||: .|:.|:..:...:....:::.::..||:..| 
Yeast  1041 QTTLLENGINRPDDLFSYVESEFGKKTKKLQD-IKQKLESFLRALLRPTLQELSERNFEDESQS- 1103

  Fly  2162 AELPYFEGDFWPNVLEE---SIKELDQEEEEKRKQAEAAEAAAAANLFSIEENEVSGDGK---KK 2220
                :|.|||...:..|   ..:||..|     |:.....::....|.:.:...|.|:.|   ||
Yeast  1104 ----FFTGDFASELTGEDFFGFRELGLE-----KEFGVLSSSVPLQLLTTQFQTVDGETKVQAKK 1159

  Fly  2221 GQ---------KKAKKS-------------------NKSKAAQRKNSKKS-NEHQSGNDLSTKIY 2256
            .|         ||..|.                   .:|||...|.||.| |:..|........:
Yeast  1160 IQPEESDSIVYKKITKGMLDAGSFWNTLLPLLQKDYERSKAYIAKQSKSSANDKTSMTSTEDNSF 1224

  Fly  2257 ATMEKHKEV 2265
            |.:|:.:.|
Yeast  1225 ALLEEDQFV 1233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nejNP_001188575.1 ZnF_TAZ 530..600 CDD:214717
KIX 946..1024 CDD:280354
Bromo_cbp_like 1705..1812 CDD:99927 33/136 (24%)
RING_CBP-p300 1824..1906 CDD:276805 20/107 (19%)
PHD_CBP_p300 1908..1939 CDD:277032 6/39 (15%)
HAT_KAT11 1970..2283 CDD:285432 81/462 (18%)
ZZ_CBP 2339..2379 CDD:239077
ZnF_TAZ 2404..2476 CDD:214717
SPT7NP_009637.1 COG5076 282..680 CDD:227408 79/412 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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