DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nej and HAC5

DIOPT Version :9

Sequence 1:NP_001188575.1 Gene:nej / 43856 FlyBaseID:FBgn0261617 Length:3282 Species:Drosophila melanogaster
Sequence 2:NP_187904.1 Gene:HAC5 / 820484 AraportID:AT3G12980 Length:1670 Species:Arabidopsis thaliana


Alignment Length:1879 Identity:420/1879 - (22%)
Similarity:671/1879 - (35%) Gaps:581/1879 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   957 LRNHLVHKLVQAIFPTSDPTTMQDKRMHNLVSYAEKVEKDMYEMAKSRSEY--YHLLAEKIYKIQ 1019
            ||..:::: ..|......|:...|.....|...|:::|..|:..|.|:.:|  :.....::....
plant    43 LRQEMLNR-TYAWLQQRQPSKTDDASKAKLSEVAKRLESAMWRTATSKEDYLDFRSFDVRVESTL 106

  Fly  1020 KELEEKRLKRKEQHQQMLMQQQGV---------ANPVAGGAAGGAG---SAAGVAGGVVLPQQQQ 1072
            |:|..:|..........::|..||         |.|:...:...:.   |.|....|.:||..:.
plant   107 KQLLSQRRANPSSSVSTMVQTPGVSHGWGQSYTATPMVDTSKFNSSNNLSDATTETGRLLPTNRM 171

  Fly  1073 QQ------QQQQQQQGQ-------------QPLQSCIHPSISPMGGVM--------PPQQLRPQG 1110
            .:      :|:....||             ...||..:...|..||.:        .|.||:.|.
plant   172 YRGTINNGRQELSAVGQMIPTPGFDNSANADVYQSHRNEEYSGDGGKLLATGSDFGNPSQLQKQR 236

  Fly  1111 PPG---ILG---------------QQTAAG-----LGVGVGVTNNMVTMRSHSPGGNMLALQQQQ 1152
            |.|   ::|               .|..:|     |..|||::.|.|.: ::.|..:...|....
plant   237 PTGSNDLMGYNLDHQLGGGFRSNIHQNTSGMTSIPLNAGVGMSGNNVHL-ANVPRSSEGVLSSTH 300

  Fly  1153 RMQFPQQQQQ-----------QPPGSGAGKMLVG-------PPGP-------------------- 1179
            ...|.|..||           :...|.:|..:.|       ..|.                    
plant   301 FSTFSQPSQQPVEQLQVSHVNRYSMSNSGTFVSGNLYGVQTSSGSIETAVDMNSMSLNSMRRVDT 365

  Fly  1180 ---SPGGMVVNPALSPYQTTNVLTSPVPGQQQQQQFINANGGTGAN-----PQLSEIMKQRHIHQ 1236
               |..|:..||.|.|:              .:.||.|.|..:.:|     .|:|....:|..:|
plant   366 SFGSQSGLQNNPLLKPH--------------LRHQFENGNFQSSSNSKENLAQVSHRPLERQFNQ 416

  Fly  1237 QQQQQQQQQQQGMLLPQSPFSNSTPLQQQQQQQQQQQQQQQATSNSFSSPMQQQQQGQQQQQQKP 1301
            |....|..||: :|:....:..|.|......|.:.:.:.:..........:.:.:..:.|.|.|.
plant   417 QAHYGQYHQQE-LLMNNDAYRQSQPASNLVSQVKNEPRVEYYNEAFQMQAINKVEPSKPQNQYKQ 480

  Fly  1302 GSVLNNMPPTPTSLEALNAGAGAPGTGGSASNVTVSAPSPSPGFLSNGPSIGTPSNNNNNSSANN 1366
            .:|.:..                  .|..::.|:.|....||.|..........|...::||.:.
plant   481 NTVKDEY------------------VGAQSAPVSSSQLKMSPSFPPQTHQTQQVSQWKDSSSLSA 527

  Fly  1367 NPPSVSSLMQQPLSNRPGTPPYIPASPVPATSASGLAASSTPASA--AATCASSGSGSNSSSGAT 1429
            ....||.|.|...|::..||               ::.:|.....  .........|:|:||.. 
plant   528 GVQPVSGLGQWHSSSQNLTP---------------ISKNSNEEREHFGVRFHKQHEGTNNSSSV- 576

  Fly  1430 AAGASSTSSSSSAGSGTPLSSVSTPTSATMATSSGGGGGGGG-----------------NAGG-- 1475
               ..||:..:.|.||| |.....|....:.:....|..|..                 ||..  
plant   577 ---RESTNCLTVAPSGT-LDVPHLPVGINVLSKQLNGDCGLSYKNQRRWLLFLLHVRKCNAAEDN 637

  Fly  1476 ------------------------------------------GSSTTPA---------------- 1482
                                                      |....|.                
plant   638 CESKYCFTAKTLLKHINCCKAPACAYQYCHQTRQLIHHYKHCGDEACPVCVFVKNFKEKQKEKFT 702

  Fly  1483 ----SNPLLLMSGGTAGGGTGATTTTSTSSSSRMMSSSSSLSSQMAALEAAARDNDDETPSPSGE 1543
                :.|            :.|:.......|...|.:||...|:...:.      ||..|||..:
plant   703 FLQRAEP------------SSASLNHGPKESFESMRTSSERDSEAPFVV------DDLQPSPKRQ 749

  Fly  1544 -----------NTNGSGGSGNAG--------GMASKGKLDSIKQDDDIKKEFMDDSCGGNNDSSQ 1589
                       :|.|:..:.:||        |:..|.:|.|             |.|.....:..
plant   750 KVEKPSQFAYPDTQGNPATISAGVSQAHFSMGLQEKDRLPS-------------DVCKPVRSNVP 801

  Fly  1590 MDCSTGGGKGKNVNNDGTSMIKMEIKTEDGLDGEVKIKTEAMDVDEAGGSTAGEHHGEGGGGSGV 1654
            |            |.|.:...:..:.....|:..|...|               |.|..|     
plant   802 M------------NADSSDSSRRLVPVSRELEKPVCKDT---------------HMGRHG----- 834

  Fly  1655 GGGKDNINGAHDGGATGGAVDIKPKTETKPLVPEP----------LAPNAGDKKKKC-----QFN 1704
                  :..|.||.:...:...|||...:...|:.          .|.|.|..|.|.     .|.
plant   835 ------VKSALDGESLRLSKQEKPKRMNEISAPKEENAEQSLGVVSASNCGKSKIKGVSLIELFT 893

  Fly  1705 PEELRTALLPTLEKLYRQEPESVPFRYPVDPQALGIPDYFEIVKKPMDLGTIRTNIQNGKYSDPW 1769
            ||:                         |:....|:..:         :|..:|..:..|...  
plant   894 PEQ-------------------------VEEHIRGLRQW---------VGQSKTKAEKNKAMG-- 922

  Fly  1770 EYVDDVWLMFDNAWLYNRKTSRVYRYCTKLSEVFEAEIDPVMQALGYC--CGRKYTFNPQVLCCY 1832
                  ..|.:|:          .:.|......||.  .|:     ||  ||.:           
plant   923 ------LSMSENS----------CQLCAVERLAFEP--TPI-----YCTPCGAR----------- 953

  Fly  1833 GKQLCTIPRDAKYYSYQNSLKEYGVASNRYTYCQKCFNDIQGDTVTLGDDPLQSQTQIKKDQFKE 1897
                  :.|:|.:|:..       ...:|:..|..|:|:.:.:||::...|      :.|.:|::
plant   954 ------VKRNAMHYTVV-------AGESRHYVCIPCYNEARANTVSVDGTP------VPKSRFEK 999

  Fly  1898 MKNDHLELEPFVNCQECGRKQHQICVLWLDSIWPGG--------FVCDNCL--KKKNSKRKENKF 1952
            .|||....|.:|.|.:|...|||||.|:      .|        :.|.||.  :.:..:||....
plant  1000 KKNDEEVEESWVQCDKCQAWQHQICALF------NGRRNHGQAEYTCPNCYIQEVEQGERKPVSQ 1058

  Fly  1953 N----AKRLPTTKLGVYIETRVNNFLKKKE--------------AGAGEVHIRVVSSSDKCVEVK 1999
            |    ||.||.:.|..::|.|:...||::.              .||..:.||||:|.||.:|||
plant  1059 NVILGAKSLPASTLSNHLEQRLFKKLKQERQERARLQGKSYEEVPGADSLVIRVVASVDKILEVK 1123

  Fly  2000 PGMRRRFVE---QGEMMNEFPYRAKALFAFEEVDGIDVCFFGMHVQEYGSECPAPNTRRVYIAYL 2061
            |    ||::   :....:||||::||:..|::::|::||.|||:|||:|::..:||.||||::||
plant  1124 P----RFLDIFREDNYSSEFPYKSKAILLFQKIEGVEVCLFGMYVQEFGTDSASPNQRRVYLSYL 1184

  Fly  2062 DSVHFFRP-------RQYRTAVYHEILLGYMDYVKQLGYTMAHIWACPPSEGDDYIFHCHPTDQK 2119
            |||.:|||       ...||.||||||:||:||.|:.|::..:||||||.:|:|||.:|||..||
plant  1185 DSVKYFRPDVRTVSGEALRTFVYHEILIGYLDYCKKRGFSSCYIWACPPLKGEDYILYCHPEIQK 1249

  Fly  2120 IPKPKRLQEWYKKMLDKGMIERIIQD----YKDILKQAMEDKLG-SAAELPYFEGDFWPNVLEES 2179
            .||..:|:|||..||.|...|:::.:    |.....|:.|.:.. :||.||||:||:||...|:.
plant  1250 TPKTDKLREWYLAMLKKASKEKVVVECTNFYDHFFVQSGECRAKVTAARLPYFDGDYWPGAAEDL 1314

  Fly  2180 IKELDQEEEEKR-------KQAEAAEAAAAANLFSIEENE------------------------- 2212
            |.::.|||:.|:       |:..:..|..|.....:..|.                         
plant  1315 IDQMSQEEDGKKSNRKLMPKKVISKRALKAVGQLDLSVNASKDLLLMHKLGEIILPMKEDFIMVH 1379

  Fly  2213 ------------VSGDGKKKGQKKAKKSNKSKAAQRKNSK---KSNEHQSGNDLSTKIYATMEKH 2262
                        |||             |:....|.||.:   |.:|.:. |.:..:.:...:|.
plant  1380 LQHCCKHCCTLMVSG-------------NRWVCNQCKNFQICDKCHEVEE-NRVEKEKHPVNQKE 1430

  Fly  2263 KEVFFVIRLHSAQSAASLAPIQDPDPLLTCDLMDGRDAFLTLARDKHFEFSSLRRAQFSTLSMLY 2327
            |.|.:.:.:.:..:     .|:|.|.:|..:..|.|.|||:|.:..|:::.:||||:.|::.:||
plant  1431 KHVLYPVAIDNIPT-----EIKDNDDILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMILY 1490

  Fly  2328 ELHNQGQDKFVYTCNHCKTAVETR--YHCTVCDDFDLCIVCKEK-VGHQHKMEKLGFDIDDGSAL 2389
            .|||.....|...|..|:..:||.  :.|.||.|:|:|..|..| :.|.|.:      |...|| 
plant  1491 HLHNPTVPAFAMACAICQQELETAQGWRCEVCPDYDVCNACYSKGINHPHSI------ISRPSA- 1548

  Fly  2390 ADHKQANPQEARKQSIQRCIQSLAHACQCRDANCRLPSCQKMKLVVQHTKNCKRKPNGGCPICKQ 2454
            .|....|.|..:.|:.| ..:.|.|...|..|.|:.|.|:.:|.:::|...||.:   ||..||:
plant  1549 TDSVVQNTQTNQIQNAQ-LREVLLHVMTCCTAQCQYPRCRVIKGLIRHGLVCKTR---GCIACKK 1609

  Fly  2455 LIALCCYHAKNCEEQKCPVPFCPNIKHKLKQQQSQQKFQQQQLLRRRVALMSRTAAPAA 2513
            :.:|...|::||.:.:|.||.|..::....::      |||...|||.|:|......||
plant  1610 MWSLFRLHSRNCRDPQCKVPKCRELRAHFSRK------QQQADSRRRAAVMEMVRQRAA 1662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nejNP_001188575.1 ZnF_TAZ 530..600 CDD:214717
KIX 946..1024 CDD:280354 14/68 (21%)
Bromo_cbp_like 1705..1812 CDD:99927 13/106 (12%)
RING_CBP-p300 1824..1906 CDD:276805 15/81 (19%)
PHD_CBP_p300 1908..1939 CDD:277032 11/38 (29%)
HAT_KAT11 1970..2283 CDD:285432 123/388 (32%)
ZZ_CBP 2339..2379 CDD:239077 14/42 (33%)
ZnF_TAZ 2404..2476 CDD:214717 23/71 (32%)
HAC5NP_187904.1 ZnF_TAZ 612..690 CDD:214717 5/77 (6%)
PHD_HAC_like 973..1043 CDD:277086 23/81 (28%)
HAT_KAT11 1103..>1323 CDD:413203 102/223 (46%)
ZZ 1504..1540 CDD:412288 13/35 (37%)
ZnF_TAZ 1557..1632 CDD:214717 25/78 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 206 1.000 Domainoid score I822
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 450 1.000 Inparanoid score I385
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001062
OrthoInspector 1 1.000 - - otm2820
orthoMCL 1 0.900 - - OOG6_101987
Panther 1 1.100 - - O PTHR13808
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X719
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.860

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