DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nej and Brd8

DIOPT Version :9

Sequence 1:NP_001188575.1 Gene:nej / 43856 FlyBaseID:FBgn0261617 Length:3282 Species:Drosophila melanogaster
Sequence 2:NP_001348065.1 Gene:Brd8 / 78656 MGIID:1925906 Length:954 Species:Mus musculus


Alignment Length:1077 Identity:216/1077 - (20%)
Similarity:334/1077 - (31%) Gaps:397/1077 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   927 VAGGAGGGNGGNTGPPGDNEKDW--RESVTADLRNHLVH-------KLVQAIFPTSDPTTMQD-- 980
            :|.|.|.....:|||    .:.|  ||.:.  |.:.::.       .:.:||.|.::|....|  
Mouse     1 MATGTGKHKLLSTGP----TEPWSIREKLC--LASSVMRSGDQNWVSVSRAIKPFAEPGRPPDWF 59

  Fly   981 KRMHNLVSYAEKVEKDMYEMAKSRSE------------YYHLLAEKIYKIQKELEE-----KRLK 1028
            .:.|....|:|.:|.......| |.|            ...|.||::.:::|.::|     :|||
Mouse    60 SQKHCASQYSELLETTETPKRK-RGEKGEVVETVEDVIVRKLTAERVEELKKVIKETQERYRRLK 123

  Fly  1029 RKEQHQQMLMQQQGVANPVAGGAAGGAGS-----AAGVAGGVVLPQQQQQQQQQQQQQGQQPLQS 1088
            |..:    |:|            ||...|     ...:|....|.:::.:.:::......|..|:
Mouse   124 RDAE----LIQ------------AGHMDSRLDELCNDIAMKKKLEEEEAEVKRKATDAAYQARQA 172

  Fly  1089 CIHP--------------SISPMGGVMPPQQLRPQGPPGILGQQTAAGLGVGVGVTNNMVTMRSH 1139
            ...|              |.|| ||..|...|.|                         .||...
Mouse   173 VKTPPRRLPTVMVRSPVDSASP-GGDYPLGDLTP-------------------------TTMEEA 211

  Fly  1140 SPGGNMLALQQQQRMQFPQQQQQQPPGSGAGKMLVGPPGPSPGGMVVNPALSPYQTTNVLTSPVP 1204
            :.|.....|.......||......||||.                   |..:|       .:|:.
Mouse   212 TSGVTPGTLPSTPVTSFPGIPDTLPPGSA-------------------PLEAP-------MTPIT 250

  Fly  1205 GQQQQQQFINANGGTGANPQLSEIMKQRHIHQQQQQQQQQQQQGMLLPQSPFSNSTPLQQQQQQQ 1269
            ....|::.:........:|.|||::|                :|.|||.||              
Mouse   251 DDSPQKKMLGQKATPPPSPLLSELLK----------------KGSLLPTSP-------------- 285

  Fly  1270 QQQQQQQQATSNSFSSPMQQQQQGQQQQQQKPGSVL-----NNMPPTPTSLEALNAGAGAPGTGG 1329
                    ...|....|:............:.|.||     ..:.||.:::.|..|.:|||    
Mouse   286 --------RLVNESEMPVPPGHLNSTGVLLEVGGVLPMIHGGEIQPTTSAVAASPAASGAP---- 338

  Fly  1330 SASNVTVSAP----SPSPGF--LSNGPSIGTPSNNNNNSSANNNPPSVSSLMQQPLSNRPGTPPY 1388
            :.|.:..:.|    :|.|.|  :::.|.:...            ||.|.|:.|..:...|..|  
Mouse   339 TLSRLLEAGPTQFTTPLPSFTTVASEPPVKLV------------PPPVESVSQATIVMMPALP-- 389

  Fly  1389 IPASPVPATSASGLAASSTPASAAATCASSGSGSNSSSGATAAGASSTSSSSSAGSGTPLSSVST 1453
                              .|:||||.       |.|.|||..         |......||.:|..
Mouse   390 ------------------APSSAAAV-------STSESGAPV---------SQPEPCVPLEAVGD 420

  Fly  1454 PTSATMATSSGGGG------------GGGGNAGGGS---STTPASNPLLLMSGGTAGGGTGATTT 1503
            |.:.|::..|....            .|...|.|||   |.....:..|......|...||....
Mouse   421 PHTVTVSMDSNEISMIINSIKEECFRSGVAEAPGGSKAPSIDGKEDLDLAEKMDIAVSYTGEELD 485

  Fly  1504 TSTSS------SSRMMSSSSSLSSQMAALEAA---ARDNDD--------------------ETPS 1539
            ..|..      ..::......|  .:||:|||   ..:|||                    ..|:
Mouse   486 FETVGDIIAIIEDKVDDHPEVL--DVAAVEAALSFCEENDDPQSLPGPWEHPIQQERDKPVPLPA 548

  Fly  1540 P---------------------------SG-----ENTNGSGGSGNAGGMASKGKLDSIK----- 1567
            |                           ||     |.|....|...|..:|..|.:.|::     
Mouse   549 PEMTVKQERLDFEESENKGLHDLVDIRDSGVEIKVEPTEPEPGMSGAEIVAGVGPVPSMEPPELR 613

  Fly  1568 -QDDDIKKEFMDDSCGGNNDSSQMDCSTGGGKGKNVN--------------NDGTSMIKMEIKTE 1617
             ||.|   |....|..|  |..:.|.|:|.|..:.::              :.|:::|      |
Mouse   614 SQDSD---EEPRSSAAG--DIGEADGSSGKGDERPLSAVKTEASPESMLSPSHGSNLI------E 667

  Fly  1618 DGLDGEVKIKTEAMD-VDEAGGSTAGEHHGEGGGGSGVGGGKDNINGAHDGGATGGAVDIKPKTE 1681
            |.|:.|.:.|.|..| :.|..|:..|....:..|.          :...||.:...::: :||.|
Mouse   668 DPLEAETQHKFEMSDSLKEESGTIFGSQIKDAPGD----------DEEEDGVSEAASLE-EPKEE 721

  Fly  1682 -----------TKPLVPE---------------------PLAPNAGDKKKKCQFNPEELRTALLP 1714
                       .:|.|.|                     |.:| |..:...|..:.|.::.    
Mouse   722 DQGEGYLSEMDNEPPVSESDDGFSIHNATLQSHTLADSIPSSP-ASSQFSVCSEDQEAIQA---- 781

  Fly  1715 TLEKLYRQEPESV-----------PFRYPVDPQALGIPDYFEIVKKPMDLGTIRTNIQNGKYSDP 1768
              :|::::....|           .|..||....  .|.|..||::||||.||:.||:||.....
Mouse   782 --QKIWKKAIMLVWRAAANHRYANVFLQPVTDDI--APGYHSIVQRPMDLSTIKKNIENGLIRST 842

  Fly  1769 WEYVDDVWLMFDNAWLYNRKTSRVYRYCTKLS-EVFE 1804
            .|:..|:.|||.||.:||.....||....::. :|.|
Mouse   843 AEFQRDIMLMFQNAVMYNSSDHDVYHMAVEMQRDVLE 879

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nejNP_001188575.1 ZnF_TAZ 530..600 CDD:214717
KIX 946..1024 CDD:280354 20/100 (20%)
Bromo_cbp_like 1705..1812 CDD:99927 33/112 (29%)
RING_CBP-p300 1824..1906 CDD:276805
PHD_CBP_p300 1908..1939 CDD:277032
HAT_KAT11 1970..2283 CDD:285432
ZZ_CBP 2339..2379 CDD:239077
ZnF_TAZ 2404..2476 CDD:214717
Brd8NP_001348065.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 161..273 27/163 (17%)
Atrophin-1 <176..356 CDD:331285 49/273 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 520..547 3/26 (12%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 584..745 39/182 (21%)
Bromo_brd8_like 782..885 CDD:99939 32/100 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 900..922
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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