DRSC/TRiP Functional Genomics Resources

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Protein Alignment nej and tbrd-2

DIOPT Version :9

Sequence 1:NP_001188575.1 Gene:nej / 43856 FlyBaseID:FBgn0261617 Length:3282 Species:Drosophila melanogaster
Sequence 2:NP_611401.2 Gene:tbrd-2 / 37207 FlyBaseID:FBgn0034423 Length:674 Species:Drosophila melanogaster


Alignment Length:400 Identity:88/400 - (22%)
Similarity:146/400 - (36%) Gaps:94/400 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly  1673 AVDIKPKTETKP-LVPEPLAPNAGDKKKKCQFNPEELRTALLPTLEKLYRQEPESVPFRYPVDPQ 1736
            :|.:|.....:| .:|.|  ..||....|..:..:.|       |::. |::..::.|..|||.:
  Fly     8 SVKLKLPNRVQPEFIPHP--GMAGRYTNKLHYFKKHL-------LDEA-RKKKYALDFLEPVDTE 62

  Fly  1737 ALGIPDYFEIVKKPMDLGTIRTNIQNGKYSDPWEYVDDVWLMFDNAWLYNRKTSRVYRYCTKLSE 1801
            ||.:|.|:.::.:|||:|||...:||..|....|.:.|...:..|.:|:||....|||....|.:
  Fly    63 ALMVPTYYTVIHRPMDIGTIVKRVQNNYYKSVNEAIADFKQIISNCFLFNRSGDVVYRKGQMLEK 127

  Fly  1802 VFEAEIDPVMQALGYCCGRKYTFNPQVLCCYGKQLCTIPRDAKYYSYQNSLKEYGVASNRYTYCQ 1866
            .|..::            |.....|:|.|....:....||.....|.|...|           |:
  Fly   128 FFHKKL------------RGMPSGPEVPCNRDPKAVGRPRTNAPSSAQTERK-----------CR 169

  Fly  1867 KCFNDIQGDTVTLGDDPL----------QSQTQIKKDQFKEMKNDHLELEPFVNCQECGRKQHQI 1921
            :....:|  ::|...|.:          ..|.::.:..||.:....|.::      .|.||.|:.
  Fly   170 ELLKKLQ--SITNQTDAMTRNFFSNKWDSLQKKVDRQYFKSVNEFCLHVD------GCFRKYHEP 226

  Fly  1922 CVLWLDSIW--PGGFVCDNCLKKKNSKRKENKFNA----KRLPTTKLGV---------------- 1964
            ..:..:.::  |..:    |.....:...|:..||    :.|...||.|                
  Fly   227 AKILYERVFNQPAAW----CTSMNGNSSLESALNAADLNELLAAAKLTVNSLMQCVQMPGSGEPL 287

  Fly  1965 ----YIET---RVNNFLKKKEAGAGEVHIRVVSSSDKCVEVKPGMRRRFVEQGEMMNEFPYRAKA 2022
                .:||   .:|..:.|.|||...   ....||.|..::.|......| |||..     .|..
  Fly   288 TAKSLVETFCDTLNKMINKMEAGQRN---SPNPSSSKRQKMSPEQETDLV-QGEFK-----PAME 343

  Fly  2023 LFAFEEVDGI 2032
            |.:..|:|.:
  Fly   344 LLSGNEIDNL 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nejNP_001188575.1 ZnF_TAZ 530..600 CDD:214717
KIX 946..1024 CDD:280354
Bromo_cbp_like 1705..1812 CDD:99927 31/106 (29%)
RING_CBP-p300 1824..1906 CDD:276805 16/91 (18%)
PHD_CBP_p300 1908..1939 CDD:277032 5/32 (16%)
HAT_KAT11 1970..2283 CDD:285432 17/62 (27%)
ZZ_CBP 2339..2379 CDD:239077
ZnF_TAZ 2404..2476 CDD:214717
tbrd-2NP_611401.2 Bromo_gcn5_like 34..136 CDD:99941 33/121 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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