DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nej and cbp-2

DIOPT Version :9

Sequence 1:NP_001188575.1 Gene:nej / 43856 FlyBaseID:FBgn0261617 Length:3282 Species:Drosophila melanogaster
Sequence 2:NP_499201.1 Gene:cbp-2 / 186960 WormBaseID:WBGene00010545 Length:322 Species:Caenorhabditis elegans


Alignment Length:584 Identity:123/584 - (21%)
Similarity:161/584 - (27%) Gaps:317/584 - (54%)


- Green bases have known domain annotations that are detailed below.


  Fly   517 RKRQIQQQLMLLLHAHKCNRRENLNPN---------REVCNVNYCKAMKSVLAHMGTCKQSKDCT 572
            :::.:||||:||||||||:.|:..|..         ...|.:.:|..||.||.||..|...:.|.
 Worm    10 KQKLVQQQLVLLLHAHKCSLRDKENNEFAARNQPLPHTTCRLPHCPTMKEVLIHMTNCNVGRLCH 74

  Fly   573 MQHCASSRQILLHYKTCQNSGCVICYPFRQNHSVFQNANVPPGGGPAGIGGAPPGGGGAGGGAAG 637
            ..||||||||:.|:|.|....|.:|.|.::...|                               
 Worm    75 FAHCASSRQIIAHWKNCSREDCPVCTPLKRARDV------------------------------- 108

  Fly   638 AGGNLQQQQQQQQQQQQNQQPNLTGLVVDGKQGQQVAPGGGQNTAIVLPQQQGAGGAPGAPKTPA 702
                                                                             
 Worm   109 ----------------------------------------------------------------- 108

  Fly   703 DMVQQLTQQQQQQQQQVHQQQVQQQELRRFDGMSQQVVAGGMQQQQQQGLPPVIRIQGAQPAVRV 767
                                                                        |.:..
 Worm   109 ------------------------------------------------------------PLIFS 113

  Fly   768 LGPGGPGGPSGPNVLPNDVNSLHQQQQQMLQQQQQQGQNRRRGGLATMVEQQQQHQQQQQQPNPA 832
            |                                                            |:.|
 Worm   114 L------------------------------------------------------------PHLA 118

  Fly   833 QLGGNIPAPLSVNVGGFGNTNFGGAAAGGAVGANDKQQLKVAQVHPQSHGVGAGGASAGAGASGG 897
            .|           :|..||:.  |:|.|..|                 |.:|....|||.     
 Worm   119 NL-----------IGTKGNSY--GSADGEVV-----------------HQIGVSTMSAGR----- 148

  Fly   898 QVAAGSSVLMPADTTGSGNAGNPNQNAGGVAGGAGGGNGGNTGPPG--DNEKDWRESVTADLRNH 960
                                             ...||..|..||.  ...|:|...||.|||||
 Worm   149 ---------------------------------ITNGNISNLPPPNVPVRTKEWHRQVTNDLRNH 180

  Fly   961 LVHKLVQAIFPTSDPTTMQDKRMHNLVSYAEKVEKDMYEMAKSRSEYYHLLAEKIYKIQKELEEK 1025
            :|.|||:||.|.  |..|.|.|:.:|.:||.||||:::|.|..|..||||||||||:|||||:||
 Worm   181 IVGKLVKAICPA--PEMMNDIRLKDLNAYARKVEKEVFETAIDRKNYYHLLAEKIYEIQKELQEK 243

  Fly  1026 RLKRKEQHQQMLMQQQGVANPVAGGAAGGAGSAAGV---AGGVVLPQQQQQQQQQQQQQGQQPL 1086
            :..|..|                |.|.......|.:   .||..| :..|:.:..:|.|.||||
 Worm   244 KNSRLNQ----------------GAAQSPLDEFARMRIDEGGHQL-RTNQETETNRQNQSQQPL 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nejNP_001188575.1 ZnF_TAZ 530..600 CDD:214717 30/78 (38%)
KIX 946..1024 CDD:280354 45/77 (58%)
Bromo_cbp_like 1705..1812 CDD:99927
RING_CBP-p300 1824..1906 CDD:276805
PHD_CBP_p300 1908..1939 CDD:277032
HAT_KAT11 1970..2283 CDD:285432
ZZ_CBP 2339..2379 CDD:239077
ZnF_TAZ 2404..2476 CDD:214717
cbp-2NP_499201.1 zf-TAZ 23..99 CDD:280324 29/75 (39%)
KIX 166..242 CDD:280354 45/77 (58%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 108 1.000 Domainoid score I4032
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2438
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.840

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