DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nej and baz-2

DIOPT Version :9

Sequence 1:NP_001188575.1 Gene:nej / 43856 FlyBaseID:FBgn0261617 Length:3282 Species:Drosophila melanogaster
Sequence 2:NP_498673.3 Gene:baz-2 / 176078 WormBaseID:WBGene00001470 Length:1390 Species:Caenorhabditis elegans


Alignment Length:1547 Identity:260/1547 - (16%)
Similarity:452/1547 - (29%) Gaps:500/1547 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   578 SSRQILLHYKTCQNSGCVICYPFRQNHSVFQ---------NANVP---PGGGPAGIGGAP-PGGG 629
            ||.|.||.....|.         :|...:.|         .|:.|   ..|..|.....| ..|.
 Worm     5 SSNQFLLLLAAAQQ---------QQQQQLLQQQLAKIQKATASSPSKSTNGTSASTSAVPSTSGT 60

  Fly   630 GAGGGAAGAGGNLQQQQQQQQ----------QQQQNQQPNLTGLVVDGKQGQQVAPGGGQNTAIV 684
            .:....|....||.:.||.||          |::|.::..........|:.|:.|.......|..
 Worm    61 SSSQNEAAQLQNLAKMQQIQQLAQFGALMAAQKKQQEKAAADKAKEKEKEKQKAAAAAAAAAAKA 125

  Fly   685 LPQQQGAGGAPG-APKTPADMVQQLTQQQQQQQQQVHQQQVQQQELRRFDGMSQQVVAGGMQQQQ 748
            ......|...|| :|:..|...|.:..|..||.....|:...::.:::...|:::..||......
 Worm   126 SASTSSASAIPGLSPEMLAAWQQAIQMQALQQMMMTPQKSQMEEAIKKMMDMAKKKPAGVASTSS 190

  Fly   749 QQGLPPVIRIQGAQPAVRVLGPGGPGGPSGPNVLPNDVNSLHQQ---QQQMLQQQQQQGQNRRRG 810
            ..       ...:.|:............:..|...|.:|::..|   .|...:|||||...:::.
 Worm   191 AS-------TSSSTPSTSSASITSSNNNAANNAASNMMNNVMWQLVAAQMQQKQQQQQKDTQKKA 248

  Fly   811 GLATMVEQQQQHQQQQQQPNPAQLGGNIPAPLSVNVGGFGNTNFGGAAAGGAVGANDKQQLKVAQ 875
            ..|...::..:.||::|.                                    ..:|||.::.:
 Worm   249 DQAKKAKELAKQQQKEQD------------------------------------VKNKQQEEILK 277

  Fly   876 V----HPQSHGVGAGGASAGAGASGGQVAAGSSVLMPADTTGSGNAGN------PNQ-------N 923
            .    |..:|........|.|.|...:|.|.....:.:|:...|...|      |.|       .
 Worm   278 FLMAQHQLNHQKKHEKKQADAAALAAKVLAAHRAALESDSPEEGKKTNEAMLRLPLQLGWRRQTC 342

  Fly   924 AGGVAGGAGGGNGGNTGPPGDNEKDWRESVTADLRNHLVH-----------KLV--QAIFP--TS 973
            ...:|.....|:.....|.|.....:.| |...|..:.:|           |||  :.|.|  |.
 Worm   343 VRSIASAGVKGDVSYFAPCGKKLSTYSE-VVRYLTKNSIHYITRDNFLFNTKLVIGEFIVPKQTE 406

  Fly   974 DPTTMQDKRMH--------------NLVSYAEKVEKDMYEMAKSRSEYYH---LLAEKIYKIQKE 1021
            ...|.|::...              |::.:..|::       .|.|...|   :...||.:..:.
 Worm   407 ADETQQEREFAMFTEDDINKELTRLNVLKFVPKIQ-------ASTSNGVHEDDIKMSKIEEPDEP 464

  Fly  1022 LEEKRLKRKEQHQQMLMQQQGVANPVAGGAAGGAGSAAGVAGGVVLPQQQQQQQQQQQQQGQQPL 1086
            |:...|  .::..:.|:..|.::|.|                      .:.:.::::.......:
 Worm   465 LDPSEL--NDEFTEELVHSQIMSNGV----------------------DECKIREREADDLLVNI 505

  Fly  1087 QSCIH-PSISPMGGVMPPQQLRPQGPPGIL-----GQQTAAGLGVGVGVTNNMVTMRSHSPGGNM 1145
            ....| |..|.:|.    |.|..||....|     .|.....||:.:.:...:.::.:...|...
 Worm   506 NDVRHLPDFSRIGN----QCLSSQGFADALMVHEFVQNFGHVLGIDLEIAPKLESLCAGLDGDAN 566

  Fly  1146 LALQQQQ--------RMQFPQQQQQQPPGSGAGKMLVGPPGPSP------------GGMVVNP-- 1188
            .|.|..|        .::||....::..|.|.|:|.:.....|.            |..:..|  
 Worm   567 HAEQTLQLTRQLLRLALEFPGMGNEKRFGQGGGEMGLDRENFSEVMRLFLIDKGKRGEELSQPLL 631

  Fly  1189 -----ALSPYQTTNVLT-----------------------SPVPGQQQQQQ----FINANGGTGA 1221
                 ::||.|..::|.                       |.:.|::..::    .:.:......
 Worm   632 TCNFLSISPEQKASILAFLCDELVCSRNVVTEIDKNLDEISRLKGEKWMREGKARALRSARSKKK 696

  Fly  1222 NPQLSEIMKQRHIHQQQQQ---QQQQQQQGMLLPQSPFSNSTPLQQQQQQQ-------------- 1269
            |.:...::|:...|:...:   :....::..:.|.:..|.| |:...||||              
 Worm   697 NDEKVVVVKEEQNHESDSEPPTRPDTPKKATVAPPTVVSVS-PVSAAQQQQRKFTPGLGQCEVLT 760

  Fly  1270 QQQQQQQQATSNSFSSPMQQQQQGQQQQQQKPGSVLNNMPPTPTSLEALNAGAGAPGTGGSASNV 1334
            :|::.......:|....:.|:.|...|:....|..:.:.|               .||.....|.
 Worm   761 EQEESMSLQQMDSLIGDLHQEAQNINQKIHDTGLKIRSFP---------------FGTDRFHRNY 810

  Fly  1335 TVSAPSPSPGFLSNGPSIGTPSNN----NNNSSANNNPPS------------------------- 1370
            .:.|.:.....    .|:.|.|.|    |.|..|:.:||:                         
 Worm   811 WMLAHTDKVII----ESLATTSVNNPACNANEYASKDPPTLEQRVPGACETIDLDVIACVEDLVD 871

  Fly  1371 ------------------------------------VSSLMQQPLS--------NRPGTPPY--- 1388
                                                |.||....||        :|..|.|:   
 Worm   872 DVVLLRAKADKKTRKRYRRIENHMKRGWWTMQNRDCVESLRSCMLSRGIRERALHRLLTKPWFLN 936

  Fly  1389 ------IPASPVPATSASGLAASSTPASAAATCASSGSGSNSSSGATAAGASSTSSSSSAGSGTP 1447
                  |...||...|...|..           ....:..|::..........:..|....|.||
 Worm   937 ELKFGTITIEPVGEKSDLELVR-----------RQGWTRLNTAIDKLQCHLKMSDVSKPLPSITP 990

  Fly  1448 LSS----VSTPTSA-------TMATSSGGGGGGGGNAGGGSSTTPASNPLLLMSGGTAGGGTGAT 1501
            ..:    |..||.|       .||..                         ::.....|.....|
 Worm   991 FETQKPIVVPPTMALAQIVKDDMAWK-------------------------VIDEEVDGQELDET 1030

  Fly  1502 ----------------------------------------TTTSTSSSSRMMSSSSSLSSQMAAL 1526
                                                    .:|...::|::|.:..:|.. |...
 Worm  1031 IIRQKIIETADMVQPKFWRPKFQKLEDQDTCQLFEDWKSYVSTEAQTTSQLMVALQTLEG-MIMW 1094

  Fly  1527 EAAARDNDDE-TPSPSGENTNGSGGSGNAGGM-ASKGKLDSIKQDDDIKKEFMDDSCG------- 1582
            |.::|:...: ..|..|:......|..:...| ..:.::..:.:.|...:...::..|       
 Worm  1095 ERSSREALCQICKSMDGDEMLVCDGCESGCHMECFRPRMTKVPEGDWFCQRCREEKSGRPMCMFC 1159

  Fly  1583 ----GNNDSSQ-------MDCSTGGGKGKNVNNDGTSMIKMEIKTEDGLDG---EVK----IKTE 1629
                ||....|       .:||..|.             |..|..|..:.|   |:|    :|..
 Worm  1160 SRETGNLHQCQRCAYHVHQECSQDGP-------------KEAINPETFICGHCQEMKQMRFVKRL 1211

  Fly  1630 AMDVDEAGGSTAGEHHGEGGGGSGVGGGKDNINGA-------HDGGATGGAVDIKPKTETKPLVP 1687
            .:..:........::|.|.|..: ..|..:.:|||       ...|..|   ::|.|.|...:..
 Worm  1212 ILRSESEERELEDDNHAENGENT-KNGHMNGMNGAIAIGVHNQQNGVKG---NLKRKLEVPSIGG 1272

  Fly  1688 EPLAPNAGDKKKKCQFNPEELRTALLPTLEKLYRQEPESVPFRYPVDPQALGIPDYFEIVKKPMD 1752
            .|...|    |:.||...:||..            :..::||..||:|:.  :|.|..|:.||||
 Worm  1273 LPKNMN----KELCQLMLDELVV------------QANALPFLEPVNPKL--VPGYKMIISKPMD 1319

  Fly  1753 LGTIRTNIQNGKYSDPWEYVDDVWLMFDNAWLYNRKTSRVYRYCTKLSEVFE 1804
            |.|||...:...|..|.::.:|:.|||.|...:|...|.:.|....|.:.|:
 Worm  1320 LKTIRQKNEKLIYETPEDFAEDIELMFANCRQFNIDHSEIGRAGISLHKFFQ 1371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nejNP_001188575.1 ZnF_TAZ 530..600 CDD:214717 6/21 (29%)
KIX 946..1024 CDD:280354 20/109 (18%)
Bromo_cbp_like 1705..1812 CDD:99927 30/100 (30%)
RING_CBP-p300 1824..1906 CDD:276805
PHD_CBP_p300 1908..1939 CDD:277032
HAT_KAT11 1970..2283 CDD:285432
ZZ_CBP 2339..2379 CDD:239077
ZnF_TAZ 2404..2476 CDD:214717
baz-2NP_498673.3 FlgD 35..88 CDD:281896 13/52 (25%)
HAT_MBD 328..401 CDD:238691 13/73 (18%)
DDT 524..>564 CDD:295426 6/39 (15%)
WHIM1 622..670 CDD:292246 6/47 (13%)
WHIM3 899..931 CDD:292248 6/31 (19%)
PHD_BAZ2A_like 1102..1146 CDD:277020 5/43 (12%)
PHD 1155..1199 CDD:214584 10/56 (18%)
Bromo_BAZ2A_B_like 1278..1374 CDD:99935 34/112 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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