DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nej and bet-1

DIOPT Version :9

Sequence 1:NP_001188575.1 Gene:nej / 43856 FlyBaseID:FBgn0261617 Length:3282 Species:Drosophila melanogaster
Sequence 2:NP_001366626.1 Gene:bet-1 / 172054 WormBaseID:WBGene00022473 Length:857 Species:Caenorhabditis elegans


Alignment Length:545 Identity:115/545 - (21%)
Similarity:197/545 - (36%) Gaps:155/545 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1570 DDIKKEFMDDSCGGNNDSSQMDCSTGGGK-------GKNVNNDGTSMIKMEIKTEDGLDGEVKIK 1627
            |||:..|             .:|.|..||       .:||:    .:||..::         :..
 Worm   108 DDIETVF-------------QNCYTFNGKEDDVTIMAQNVH----EVIKKSLE---------QAP 146

  Fly  1628 TEAMDVDEAGGSTAGEHHGEGGGGSGVGGGKDNINGAHDGGATGGAVDIKPKT----------ET 1682
            .|..|:|...|....:.....||.......|::..|..:..:..|: ::...|          |:
 Worm   147 REEHDMDVYWGKNKKKPAKSDGGSKSSSSKKNDARGPSEAPSEAGS-EVSSVTTASAAAPTVSES 210

  Fly  1683 KPLVPEPLAPNAGDK--KKKCQF----NPEELRT-------------ALLPTLE----------- 1717
            ..:..:|....||.|  |:|.:.    .||.||.             .|||:::           
 Worm   211 ASVAAKPERKVAGKKTGKRKAESEDDEKPEPLRAKREVAVVKKEVHQPLLPSMKPCLKLLNDFST 275

  Fly  1718 KLYRQEPESVPFRYPVDPQALGIPDYFEIVKKPMDLGTIRTNIQNGKYSDPWEYVDDVWLMFDNA 1782
            |.|::  .:.||..|||.:.||:.||.:|:|:||||.:::..:::|.|.:|.::..||.||..|.
 Worm   276 KKYQE--FAWPFNEPVDAEQLGLHDYHKIIKEPMDLKSMKAKMESGAYKEPSDFEHDVRLMLRNC 338

  Fly  1783 WLYNRKTSRVYRYCTKLSEVFE---AEIDPVMQALGYCCGRKYTFNPQVLCCYGKQLCTIPRDAK 1844
            :|||.....|:.:..:..|||:   ||       ||....|..:..||     ...:...|:.||
 Worm   339 FLYNPVGDPVHSFGLRFQEVFDRRWAE-------LGDSSSRASSVAPQ-----SAPIAPTPKVAK 391

  Fly  1845 YYS---YQNSLKEY---------GVASNRYTYCQKCFNDIQGDTVTLGDDPLQSQ---TQIKKDQ 1894
            ..:   .:.|.||:         |..|..........:.|:.     .::.|:::   .|..||:
 Worm   392 SSAPKEPKESRKEHKKETTFEASGAKSEDLMQINNALSMIRE-----REEKLKAELAAAQAIKDK 451

  Fly  1895 FKEMKN--DHLELEPFVNCQECGRKQHQICVLWLDSIWPGGFVCDNCLKKKNSKR---------- 1947
            ...:||  :....|||.  ::...:...:|...:.............|:...||:          
 Worm   452 LTSVKNRREDNPNEPFP--EKLINETRALCTTQVGQNASSSSASSAALRNGRSKKAASARLYGYE 514

  Fly  1948 -----KENK----FNAKR--------LPTTKLGV---YIETRVNNFLKKKEAGAGEVHIRVVSSS 1992
                 ::||    :..||        ||..:|..   .|:.|..:.|.:::....||.:...|..
 Worm   515 FDSDDEDNKMALTYEEKRNLSNLINNLPNNQLNTIISIIQRRERSALMQQQLDDSEVELDFESLG 579

  Fly  1993 DKCVEVKPGMRRRFVEQGEMMNEFP 2017
            |.|:.          |.|..:...|
 Worm   580 DMCLR----------EMGAFIKTIP 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nejNP_001188575.1 ZnF_TAZ 530..600 CDD:214717
KIX 946..1024 CDD:280354
Bromo_cbp_like 1705..1812 CDD:99927 41/133 (31%)
RING_CBP-p300 1824..1906 CDD:276805 17/98 (17%)
PHD_CBP_p300 1908..1939 CDD:277032 2/30 (7%)
HAT_KAT11 1970..2283 CDD:285432 9/48 (19%)
ZZ_CBP 2339..2379 CDD:239077
ZnF_TAZ 2404..2476 CDD:214717
bet-1NP_001366626.1 Bromo_Brdt_I_like 39..145 CDD:99929 12/62 (19%)
PLN02967 95..>240 CDD:215521 29/158 (18%)
Bromo_Brdt_II_like 262..363 CDD:99930 32/102 (31%)
Ribosomal_P1_P2_L12p <371..416 CDD:419700 9/49 (18%)
BET 526..592 CDD:407211 15/75 (20%)
DMRT-like <684..730 CDD:374115
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.