DRSC/TRiP Functional Genomics Resources

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Protein Alignment a and LIN7A

DIOPT Version :10

Sequence 1:NP_524641.1 Gene:a / 43852 FlyBaseID:FBgn0000008 Length:1329 Species:Drosophila melanogaster
Sequence 2:NP_004655.1 Gene:LIN7A / 8825 HGNCID:17787 Length:233 Species:Homo sapiens


Alignment Length:119 Identity:30/119 - (25%)
Similarity:62/119 - (52%) Gaps:6/119 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly  1209 RDEEMAEVIRASMSEGSGRCTPKTITFFKGPGLKSLGFSIVGGRDSPKGNMGIFVKTVFPSGQAA 1273
            |....|:...|:.:...|...|:.:...|..  :.|||:::||::.   |..|::..:.|.|.|.
Human    85 RARATAKATVAAFAASEGHSHPRVVELPKTD--EGLGFNVMGGKEQ---NSPIYISRIIPGGVAE 144

  Fly  1274 DDGTLQAGDEIVEINGNSVQGMSHAETIGLFKNVREGT-IVLKILRRKLQKAKS 1326
            ..|.|:.||:::.:||.||:|..|.:.:.|.|..::.. :|::...:.|::.::
Human   145 RHGGLKRGDQLLSVNGVSVEGEHHEKAVELLKAAKDSVKLVVRYTPKVLEEMEA 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aNP_524641.1 PDZ_canonical <815..868 CDD:483948
PDZ3_PDZD2-PDZ1_hPro-IL-16-like 1231..1316 CDD:467240 24/85 (28%)
LIN7ANP_004655.1 Kinase interacting site 14..28
L27 31..83 CDD:197794
PDZ_Lin-7-like 105..190 CDD:467258 25/89 (28%)
Blue background indicates that the domain is not in the aligned region.

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