DRSC/TRiP Functional Genomics Resources

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Protein Alignment a and LIN7B

DIOPT Version :10

Sequence 1:NP_524641.1 Gene:a / 43852 FlyBaseID:FBgn0000008 Length:1329 Species:Drosophila melanogaster
Sequence 2:NP_071448.1 Gene:LIN7B / 64130 HGNCID:17788 Length:207 Species:Homo sapiens


Alignment Length:128 Identity:36/128 - (28%)
Similarity:64/128 - (50%) Gaps:15/128 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly  1208 IRDEEMAEVIRASMSEGSGRCTPKTITFFKGPGLKSLGFSIVGGRDSPKGNMGIFVKTVFPSGQA 1272
            ||....|:...|:.:...|...|:.:...|..  :.|||:|:||::.   |..|::..|.|.|.|
Human    69 IRAHATAKATVAAFTASEGHAHPRVVELPKTD--EGLGFNIMGGKEQ---NSPIYISRVIPGGVA 128

  Fly  1273 ADDGTLQAGDEIVEINGNSVQGMSHAETIGLFKNVREGTI---------VLKILRRKLQKAKS 1326
            ...|.|:.||:::.:||.||:|..|.:.:.|.| ..:|::         ||:.:..:.:|.:|
Human   129 DRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLK-AAQGSVKLVVRYTPRVLEEMEARFEKMRS 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aNP_524641.1 PDZ_canonical <815..868 CDD:483948
PDZ3_PDZD2-PDZ1_hPro-IL-16-like 1231..1316 CDD:467240 28/93 (30%)
LIN7BNP_071448.1 Kinase interacting site. /evidence=ECO:0000250 1..13
L27 14..66 CDD:460717
PDZ_Lin-7-like 90..175 CDD:467258 27/90 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 187..207 2/4 (50%)
Blue background indicates that the domain is not in the aligned region.

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