DRSC/TRiP Functional Genomics Resources

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Protein Alignment a and Pdzk1

DIOPT Version :9

Sequence 1:NP_001014543.1 Gene:a / 43852 FlyBaseID:FBgn0000008 Length:1329 Species:Drosophila melanogaster
Sequence 2:NP_001139473.1 Gene:Pdzk1 / 59020 MGIID:1928901 Length:519 Species:Mus musculus


Alignment Length:114 Identity:29/114 - (25%)
Similarity:50/114 - (43%) Gaps:14/114 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly  1210 DEEMAEVIRASMSEGSGR------CTPKTITFFKGPGLKSLGFSIVGGRDSPKGNMGIFVKTVFP 1268
            |:...|........|.|.      |....:.:....| .|.|||:    .:.:|..|:::..:.|
Mouse   106 DQSQREAALNDKKPGPGMNGAVEPCAQPRLCYLVKEG-NSFGFSL----KTIQGKKGVYLTNIMP 165

  Fly  1269 SGQAADDGTLQAGDEIVEINGNSVQGMSHAETIGLFKNVREGTIVLKIL 1317
            .|.|...|.| |.|.::|:||.:|:..||.|.:.  |..:.|:.::.:|
Mouse   166 QGVAMKAGVL-ADDHLIEVNGENVENASHEEVVE--KVTKSGSRIMFLL 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aNP_001014543.1 PDZ_signaling 775..865 CDD:238492
PDZ_signaling 1230..1317 CDD:238492 23/86 (27%)
Pdzk1NP_001139473.1 PDZ_signaling 7..87 CDD:238492
PDZ 132..212 CDD:214570 24/88 (27%)
PDZ_signaling 242..320 CDD:238492
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 348..374
PDZ_signaling 376..455 CDD:238492
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 479..519
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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